| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1222 |
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| Symbol | |
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| ID | 4258253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 1430178 |
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| End bp | 1430855 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638121851 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_737278 |
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| Protein GI | 114046728 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATCTC AGCATAAAGT CACAACCTAT GGTCAACCCA CCGCTCGCAC AATCAGAGTA
GGATTAGTGG AAGATCAACA GCTTGTGCGT CAGGGTATCG CCAGCTTGAT TGCCATCTCA
CAGCATATAG AGGTGAGCTG GCAGGCAGAG AATGGTCAAG AGGCGCTAAA ACGGCTGCAA
ACGGATGCCG TAGATGTGCT GTTAAGCGAT ATACGTATGC CAGTGCTCAA TGGTATCAGT
CTGCTAAAAC AGCTTCGCGC CGCACAAAAC CCCATACCAG TCATTATGTT AACCACCTTT
GATGACAGTG AACTGTTTTT AAATAGCCTG CAGGCGGGCG CGAATGGCTT CTTATTGAAA
GATGTCTCTC TGGATAAATT ACTTGAGGCC ATCGAAACCG TGGCTCAGGG CGGACACTTG
ATTGAACCAT CAGTGTTAGA ACAGATGCAG CAATCCTCTG CCACAGCGCA AAGCGTGCCG
ACCCACGACT TATTATCCGA ACGCGAACGG GAGATCTTAG GTTTTATGGC GGGGGGATTT
TCCAATAAAG AAATTGCCAA TGCGGTGTTT TTGGCCGAAG GCACGGTCAA AAACCATGTA
TCCACCATAC TGACTAAACT CGATTGCCGT GACCGCACCC AAGCTGTGCT TAAGGGGTTG
CAGCTCTCTT TGATTTAA
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| Protein sequence | MESQHKVTTY GQPTARTIRV GLVEDQQLVR QGIASLIAIS QHIEVSWQAE NGQEALKRLQ
TDAVDVLLSD IRMPVLNGIS LLKQLRAAQN PIPVIMLTTF DDSELFLNSL QAGANGFLLK
DVSLDKLLEA IETVAQGGHL IEPSVLEQMQ QSSATAQSVP THDLLSERER EILGFMAGGF
SNKEIANAVF LAEGTVKNHV STILTKLDCR DRTQAVLKGL QLSLI
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