| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1220 |
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| Symbol | |
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| ID | 4258251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 1427883 |
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| End bp | 1429451 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638121849 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_737276 |
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| Protein GI | 114046726 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACAC ATTCAAAAAA TGGTGAAAAA CACCTATCCG AAAACGCTAT TCTCCTCTCG
ACAACCGATC TGAAAGGCAA CATTAAGTAT GTCAATCAAA CCTTTTCGCA GATCAGTGAA
TATAGCTTTG CCGAGTTGCA GGGGAGCCCG CATAACATAG TGCGCCATGG TGATATGCCA
TCAGCCGCCT TTAAAATGCT TTGGGAGCGG ATAAGAAGCG GCAAACCTTG GATGGGGATT
GTCAAAAATA GAACAAAAAA CGGTGGCTAT TACTGGGTGA ATGCCTACGT CGCCCCTGTG
TACGAAAATG GCAAAATTCA TGAATATCAA TCCGTTCGCC GCCAAGCCAC CCCAGAACAA
ATCAAGGCGG CCGAGGGCAT CTATCAAGGG ATCAATCAAG GGCAACAGCC CAAGGCGCTG
AAAAAAGACC GCTTAGGATT TCGCGGAAAA ATACTCATGG CGATGTTGTT TACCATCGCA
CTAACCGCCT ACTTGGCAAC GTATTCGCCG ATCTTAGCCG CCCTTGCTGG TGGACTGCTT
GCTTTGGGTC TGTGGTATAT GCTCATGCAG CCCTTTCAGG CATTAGTGCA GGTGGCCAGC
AATATTATCG ATGATCCCGT TGCTATGGGG GTTTACACCG GCAGGCAAGA TGAAATCGGT
AAGCTAGATC TGGCGCTGCG ATTTTTGATC ACTGAAATTG GTGGCGTAGT GGGCCGAATG
GCGGACTCTG CCAGTGAGAT CCAAGAGCAG AGCGTGAATC TGAAACAAAC TATCACCAAT
ACATGGGAGC ATGCCGATAG CCAGAGCGCG CAAACCACAC AGGCTGCAAC GGCGATGGAG
CAAATGAGTG CCAGCTTTGC GGAGGTAACG GATAATATCC ATCGCACCGC ATCCGAGATG
GTTTCTAGCC ATGAGGCGGC GCAGCGTGGT CATTCACGGC TTGAAACCGT TATCGAGGCG
ATACATCAGC TGAGTGTACA GGTGAGCCAT TTCTCCGATG TGGTGCAAAC GATTGAGCAG
GACAGCCAAG CGATTCATCA AGTGCTAGAA GTGATCCGCG CGATTGCCGA TCAAACCAAT
CTGTTAGCGC TGAATGCCGC GATTGAAGCG GCGCGGGCGG GGGAAAGCGG TCGCGGTTTT
GCGGTCGTTG CCGATGAAGT CCGGCAGTTA TCTAGCCGAA CCAGCCAGTC GACCTCGCAA
ATTGAACAGA TTGTAAGCCG CTTTAAAGAC AGTACGCAAA GGGCGGCATC AACTATGACG
GCGGGTCAAG AGCAGGTTAA GCGCTCAGTT TCATTAGCGC AGGATGCCAG CATTGCCTTT
GGTGAGTTGT TATCTTCTAT CGCTAGAATT AACTCTTTGA GTGATGATAA TGCGGCCGCA
ATGACTCAGC AGACCTCCGT GGCGGCAGAA ATCAGCCGTG CTATCCATGT GATCAGCGAT
TTGGCTCAGC AGAGTTTGCA GCAGACCCAG GATGCGGCGG CGAGGGGAGA TCAGGTTTCG
CGATTATCGA CTAAAACCCA CCACCTATCG CAGCAATTCT GGCAACAGAG CGTACAACGT
AAGTATTAA
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| Protein sequence | MQTHSKNGEK HLSENAILLS TTDLKGNIKY VNQTFSQISE YSFAELQGSP HNIVRHGDMP
SAAFKMLWER IRSGKPWMGI VKNRTKNGGY YWVNAYVAPV YENGKIHEYQ SVRRQATPEQ
IKAAEGIYQG INQGQQPKAL KKDRLGFRGK ILMAMLFTIA LTAYLATYSP ILAALAGGLL
ALGLWYMLMQ PFQALVQVAS NIIDDPVAMG VYTGRQDEIG KLDLALRFLI TEIGGVVGRM
ADSASEIQEQ SVNLKQTITN TWEHADSQSA QTTQAATAME QMSASFAEVT DNIHRTASEM
VSSHEAAQRG HSRLETVIEA IHQLSVQVSH FSDVVQTIEQ DSQAIHQVLE VIRAIADQTN
LLALNAAIEA ARAGESGRGF AVVADEVRQL SSRTSQSTSQ IEQIVSRFKD STQRAASTMT
AGQEQVKRSV SLAQDASIAF GELLSSIARI NSLSDDNAAA MTQQTSVAAE ISRAIHVISD
LAQQSLQQTQ DAAARGDQVS RLSTKTHHLS QQFWQQSVQR KY
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