Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1218 |
Symbol | |
ID | 4258249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1425407 |
End bp | 1427089 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638121847 |
Product | PepSY-associated TM helix domain-containing protein |
Protein accession | YP_737274 |
Protein GI | 114046724 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGAAA CTTTTTTTAG AACCCTCTCC TGGCTGCACA CTTGGGCGGG TTTGCTCGTG TGCTGGGTAT TACTGCTGAT CTTTTTTGCT GGTAGCCTGA GTTATTTCCG CCATGAAATG AGCCTGTGGG CCGAGCCAGA GCTTCACCGC GGCGCCTTTC AAGACTATCA AACGAATCAA GTAGCGAGTC AGCTTGACCA AGGTCAAGAC TACATTGAAG CGCATTCCGC TGCGGCAACC CAACGCTGGT TAATCAATTT CCCAACCGAT AGAAGCCCCA TGCTGAGCTT TGCGTGGCAA CTGCCGCCTG AAAAGGGTCA ACGCCGTGGC AAAATCGAGC AGCATGTCAC CAAGGCCGAT GGCAGTGGCA TGATCACCGA TGTCCGCGAT AGCCGCGGCG GTGACTTCTT CTACCGTTTA CATTTCGACC TGCACTACAT GCCAGCCATT ACGGCGCGCT ATATTGTGGG TGTTTGCACT ATGTTTATGT TGATTGCCCT TATCAGCGGC ATTGTTATCC ATAAACGTAT CTTTAAAGAC TTGTTTAGCT TTCGTCAGAA CAAGGGCGCT CGCTCTTGGT TAGATGCCCA TAATGTTAGC TCTGTGATTG CCCTGCCCTA CCATTTGATG ATCACCTATA CCGGCCTTAT CACCTTAATG CTGATCTATA TCCCATGGAC GGTAAGCACG GCTTATCCTG AGGATAATCA AGCCTTTTTA AAAGAACTCA ATCCGGCGAG ACAAACAGAA AAAGCCTCGG GTATTCAAGC GGAGCAAGTG CGCTTAAGCC AACTGCTGCC GCAAGTTCAG GCAGAATGGG GCGATGCACC TATCAAGCAG GTGATGGTTT CCTATCCGAA AGATCAAAAT AGCCAAGTGA CCTTCTACCA AAATACCGGT AAAGACGTCA CCGATGAATC AACACTCCTA GTGTTTAACG GTGTCACGGG TGAACTCAAG TACGCCAGCC CCCATGAGAT GTCGGCAACC GTCGCGACCT ACGACACTAT GATGTCACTG CACACCGCGC GTTTTGCCGC GCCACTGCTG CGTATTTTGT TCTTCTTCTG CGGCTTACTC GGCTGCGCCA TGGTCGCAAC GGGCACCTTA ATGTGGGCGA TTCGTCTGCG CCAGAAACAG CAAAAGGCTA TCGATAAAGG CGAGAAAGCG AGCAGTGGTC TGCGCTTAGT CGAAGGATTA AACTTCATGT TTATCTTAGG CTTGCCCTTG GGCGCAGCAG CATTTTTCTA TGCCAACCGC CTGCTACCAA CGGATTTTGC CGCCCGCTCA GCCTGGGAAG TACATAGCTT CTTTATCGCT TTAGGAGTGA TGGGTGTATG GGCATTTTTC GGTCGAAGCC GACGTCACTG GCAATTCGCC TTGATGCTTA TCGGAGCGCT TTATTGCGCA CTGCCGCTGT TAAATGCGGC CACGTCTCCG AGCCACTTAA TTGATAATAT CCGCAGCCAA CAATGGGCAC TGGTTGGGTT TGATGTGCTC GCGCTGTTAC TGGGTTGTGC CATGCTTTTT GCGAGCACTC GACTCTCGGC CGTGGTGAAA ACACTGCAAA AGCCGAGTCG AAAAAATACC ACAGCCGTTG AAAAAGTCAG GAGAAAGCAA CCTGAACCGA GTTATGCTAA CGAACTTGCC TCGTCGTCTC CCTTGGAGGA AGCAAAATCA TGA
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Protein sequence | MKETFFRTLS WLHTWAGLLV CWVLLLIFFA GSLSYFRHEM SLWAEPELHR GAFQDYQTNQ VASQLDQGQD YIEAHSAAAT QRWLINFPTD RSPMLSFAWQ LPPEKGQRRG KIEQHVTKAD GSGMITDVRD SRGGDFFYRL HFDLHYMPAI TARYIVGVCT MFMLIALISG IVIHKRIFKD LFSFRQNKGA RSWLDAHNVS SVIALPYHLM ITYTGLITLM LIYIPWTVST AYPEDNQAFL KELNPARQTE KASGIQAEQV RLSQLLPQVQ AEWGDAPIKQ VMVSYPKDQN SQVTFYQNTG KDVTDESTLL VFNGVTGELK YASPHEMSAT VATYDTMMSL HTARFAAPLL RILFFFCGLL GCAMVATGTL MWAIRLRQKQ QKAIDKGEKA SSGLRLVEGL NFMFILGLPL GAAAFFYANR LLPTDFAARS AWEVHSFFIA LGVMGVWAFF GRSRRHWQFA LMLIGALYCA LPLLNAATSP SHLIDNIRSQ QWALVGFDVL ALLLGCAMLF ASTRLSAVVK TLQKPSRKNT TAVEKVRRKQ PEPSYANELA SSSPLEEAKS
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