Gene Shewmr7_1204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1204 
Symbol 
ID4256454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1410427 
End bp1411116 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content46% 
IMG OID638121833 
Productcytochrome B561 
Protein accessionYP_737260 
Protein GI114046710 
COG category[C] Energy production and conversion 
COG ID[COG3658] Cytochrome b 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000144641 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCG AACATATCAA AGTTAAAGTC TGGGATTTAC CCACACGCTT TTTTCACTGG 
GGCATGGTGG CCCTCATGGC CTTACTCTGG TGGAGCGCTG AAGTGGGCGA AATGCAATGG
CACCAGATTT TTGCTTATAG TTTGTTGATC TTGATTGGCT TTCGGCTTTT ATGGGGCTTG
ATTGGCAGTG ATACTGCGAG GTTTAGTCAC TTCGTGCATC ATCCCAAGGT GGTGTTTGAG
TATTTGAAAG ACGTTCGCGC AAAGGGCGTG TCAGTGGTTT TAGGGCATAA TCCGATGGGC
GGTTATATGG TGATTGTGTT GATTGCCATT ATTAACTTAC AGCTAATCAC TGGACTCTTT
GCTACTGATG ATGTGTTTAC CGAAGGTCCT CTGTACAGCT ATGTGAGTGC TGATACTGCT
TCGTTTCTCA CTTGGTTGCA TAAGATGAAT TTCAACCTGA TCTTAGCCTT GAGTGCCGTG
CATGTGTTGG CTGTCGTTGT ACACGCGCTG AAAGGTGATA GGTTAGTGGG GGCCATGCTC
AGCGGTTACA AACGGGTGTC TAAAGTTGAG CACGCCAAAT CTGAAGCTCA GTTGGTGTTT
AAATCACAGT GGTTGGCTTT AATTGTGCTG TTAATCATCG CTGGAGTGGT GTTTACCTAT
TTGATGTGGC CTATAGTACA AGTGCTCTAG
 
Protein sequence
METEHIKVKV WDLPTRFFHW GMVALMALLW WSAEVGEMQW HQIFAYSLLI LIGFRLLWGL 
IGSDTARFSH FVHHPKVVFE YLKDVRAKGV SVVLGHNPMG GYMVIVLIAI INLQLITGLF
ATDDVFTEGP LYSYVSADTA SFLTWLHKMN FNLILALSAV HVLAVVVHAL KGDRLVGAML
SGYKRVSKVE HAKSEAQLVF KSQWLALIVL LIIAGVVFTY LMWPIVQVL