Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1204 |
Symbol | |
ID | 4256454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1410427 |
End bp | 1411116 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638121833 |
Product | cytochrome B561 |
Protein accession | YP_737260 |
Protein GI | 114046710 |
COG category | [C] Energy production and conversion |
COG ID | [COG3658] Cytochrome b |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000144641 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACCG AACATATCAA AGTTAAAGTC TGGGATTTAC CCACACGCTT TTTTCACTGG GGCATGGTGG CCCTCATGGC CTTACTCTGG TGGAGCGCTG AAGTGGGCGA AATGCAATGG CACCAGATTT TTGCTTATAG TTTGTTGATC TTGATTGGCT TTCGGCTTTT ATGGGGCTTG ATTGGCAGTG ATACTGCGAG GTTTAGTCAC TTCGTGCATC ATCCCAAGGT GGTGTTTGAG TATTTGAAAG ACGTTCGCGC AAAGGGCGTG TCAGTGGTTT TAGGGCATAA TCCGATGGGC GGTTATATGG TGATTGTGTT GATTGCCATT ATTAACTTAC AGCTAATCAC TGGACTCTTT GCTACTGATG ATGTGTTTAC CGAAGGTCCT CTGTACAGCT ATGTGAGTGC TGATACTGCT TCGTTTCTCA CTTGGTTGCA TAAGATGAAT TTCAACCTGA TCTTAGCCTT GAGTGCCGTG CATGTGTTGG CTGTCGTTGT ACACGCGCTG AAAGGTGATA GGTTAGTGGG GGCCATGCTC AGCGGTTACA AACGGGTGTC TAAAGTTGAG CACGCCAAAT CTGAAGCTCA GTTGGTGTTT AAATCACAGT GGTTGGCTTT AATTGTGCTG TTAATCATCG CTGGAGTGGT GTTTACCTAT TTGATGTGGC CTATAGTACA AGTGCTCTAG
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Protein sequence | METEHIKVKV WDLPTRFFHW GMVALMALLW WSAEVGEMQW HQIFAYSLLI LIGFRLLWGL IGSDTARFSH FVHHPKVVFE YLKDVRAKGV SVVLGHNPMG GYMVIVLIAI INLQLITGLF ATDDVFTEGP LYSYVSADTA SFLTWLHKMN FNLILALSAV HVLAVVVHAL KGDRLVGAML SGYKRVSKVE HAKSEAQLVF KSQWLALIVL LIIAGVVFTY LMWPIVQVL
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