Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1202 |
Symbol | |
ID | 4256452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1408153 |
End bp | 1408617 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638121831 |
Product | DNA polymerase III chi subunit, HolC |
Protein accession | YP_737258 |
Protein GI | 114046708 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2927] DNA polymerase III, chi subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00117323 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCAAG CGCTGTTTTA TCTACTGCCG CCGATGGGGG TGAACACCGC CCTTAGTGAC ATGTATCAAT TGGCTTGCCG CTTGGCCCAA CAGGGATTTA TAAACCAGCA ACAGGTCTAT ATTCACTGTC AGGACAAGAA CATTGCCTTC GAAATCGACG AGTTATTATG GCAGTTTGAA CCCAGTGCAT TTGTCCCCCA CAACCTCAAA GGTGAAGGCC CGACCACAGG CTCACCCGTT GAAATCGGTT TTGACAGGCT CGGCCCAAAC AAAAGTCGCC AACTTCTGAT TAATCTTGCA GACCAAGTGC CTCCGTTTGC GGTAAACTTT GGTCAAATCT TCGATTTTGT GGCTAATGAC GACCAACATA AAGCGATAGC ACGTGAACGC TACCGCCAAT ATCGTGGCTT AGGGATTGAA TTAACAACCC AAAATTTAGC AACACATCCA CTTAATTTAG CTTGA
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Protein sequence | MTQALFYLLP PMGVNTALSD MYQLACRLAQ QGFINQQQVY IHCQDKNIAF EIDELLWQFE PSAFVPHNLK GEGPTTGSPV EIGFDRLGPN KSRQLLINLA DQVPPFAVNF GQIFDFVAND DQHKAIARER YRQYRGLGIE LTTQNLATHP LNLA
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