Gene Shewmr7_1202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1202 
Symbol 
ID4256452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1408153 
End bp1408617 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content47% 
IMG OID638121831 
ProductDNA polymerase III chi subunit, HolC 
Protein accessionYP_737258 
Protein GI114046708 
COG category[L] Replication, recombination and repair 
COG ID[COG2927] DNA polymerase III, chi subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00117323 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAAG CGCTGTTTTA TCTACTGCCG CCGATGGGGG TGAACACCGC CCTTAGTGAC 
ATGTATCAAT TGGCTTGCCG CTTGGCCCAA CAGGGATTTA TAAACCAGCA ACAGGTCTAT
ATTCACTGTC AGGACAAGAA CATTGCCTTC GAAATCGACG AGTTATTATG GCAGTTTGAA
CCCAGTGCAT TTGTCCCCCA CAACCTCAAA GGTGAAGGCC CGACCACAGG CTCACCCGTT
GAAATCGGTT TTGACAGGCT CGGCCCAAAC AAAAGTCGCC AACTTCTGAT TAATCTTGCA
GACCAAGTGC CTCCGTTTGC GGTAAACTTT GGTCAAATCT TCGATTTTGT GGCTAATGAC
GACCAACATA AAGCGATAGC ACGTGAACGC TACCGCCAAT ATCGTGGCTT AGGGATTGAA
TTAACAACCC AAAATTTAGC AACACATCCA CTTAATTTAG CTTGA
 
Protein sequence
MTQALFYLLP PMGVNTALSD MYQLACRLAQ QGFINQQQVY IHCQDKNIAF EIDELLWQFE 
PSAFVPHNLK GEGPTTGSPV EIGFDRLGPN KSRQLLINLA DQVPPFAVNF GQIFDFVAND
DQHKAIARER YRQYRGLGIE LTTQNLATHP LNLA