Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1200 |
Symbol | |
ID | 4256450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1403454 |
End bp | 1403651 |
Gene Length | 198 bp |
Protein Length | 65 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638121821 |
Product | carbon storage regulator |
Protein accession | YP_737256 |
Protein GI | 114046706 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) |
TIGRFAM ID | [TIGR00202] carbon storage regulator (csrA) |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000197076 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGATTT TGACTCGTCG TGTTGGCGAA ACACTGATGA TTGGTGATGA AGTCACAGTT ACAGTGCTAG GGGTAAAGGG CAATCAAGTG CGTATTGGTG TGAATGCACC AAAAGAGGTT TCTGTCCACC GTGAAGAAAT CTATCAGCGC ATTCAATCTG AAAAATCAGG TACACCTTCA GAAGGTGGTA ACTTTTAA
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Protein sequence | MLILTRRVGE TLMIGDEVTV TVLGVKGNQV RIGVNAPKEV SVHREEIYQR IQSEKSGTPS EGGNF
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