Gene Shewmr7_1199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1199 
Symbol 
ID4256449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1402079 
End bp1403335 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content48% 
IMG OID638121820 
Productaspartate kinase 
Protein accessionYP_737255 
Protein GI114046705 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0527] Aspartokinases 
TIGRFAM ID[TIGR00657] aspartate kinase
[TIGR00656] aspartate kinase, monofunctional class 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000597152 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCGAAA AACGAAAGCT TAGTGGTAGC AAGCTTTTTG TGAAGAAGTT TGGCGGCACT 
TCGGTGGGTT CGATTGAACG CATCGAAGTG GTTGCTGAGC AAATTGCAAA GTCCGCTCAC
AATGGTGAGC AGCAGGTTTT GGTGCTTTCT GCGATGGCAG GGGAGACCAA CAGACTATTT
GCCCTTGCGG CGCAAATCGA TCCCCGCGCG AGTGCGCGGG AACTCGATAT GCTGGTATCG
ACAGGAGAGC AAATCAGTAT TGCGTTAATG GCGATGGCGC TGCAACGTCG CGGCATTAAT
GCAAGATCCC TGACTGGTGA TCAAGTCCAA ATTCATACAA ACAGTCAGTT TGGTCGAGCG
AGTATTGAAA GTGTCGATAC GGCATACTTA ACCTCTTTGC TGAGCGACGG CATAGTGCCG
ATTGTGGCGG GTTTTCAAGG TATCGATCCC AATGGGGATG TGACTACCTT AGGCCGCGGC
GGTTCGGATA CTACCGCAGT GGCACTCGCT GCGGCGTTAA AAGCTGATGA ATGCCAAATC
TTTACCGATG TACCCGGTGT ATTTACTACC GATCCGAATA TCGATAGTAG TGCCAGACGC
CTCGATGTGA TTGGTTTTGA TGTGATGCTA GAAATGGCAA AACTCGGCGC TAAGGTATTG
CATCCCGATT CGGTTGAATA CGCACAGCGT TTTAAAGTAC CGTTGCGGGT ATTATCGAGC
TTTGAGGCGG GCCATGGAAC ATTGATCCAG TTCGGTGATG AATCAGAGCT GGCGATGGCC
GCTTCGGTGC AAGGCATTGC GATTAATAAG GCCTTAGCGA CCTTAACTAT CGAAGGCTTG
TTTACCAGCA GCGAGCATTA CCAAGCGCTG TTAGCTTGCT TGGCACGGCT TGAGATTGAT
GTTGAGTTTA TAACCCCGCT CAAACTTAAT GAAACCTCAG CAGCCGAATG TGTCAGTTTT
ATGCTGGCCG AAGCCAAGGT GGATATTTTA TTGCACGAGC TCGAGCTTTT AAGTGAAAGT
CTTGACCTAG GCCAATTGAT TGTTGAGCGT CAACGTGCAA AAGTGTCTTT AGTTGGCAAA
GGTTTACAGG CAAAAGTTGG ATTATTGACT AAGATGTTAG ATGTATTGGG TAATGAAACA
ATCCATGCTA AGTTACTTTC GACATCGGAG AGTAAATTGT CAACTGTGAT CGATGAAAGG
GACTTACACA AGGCGGTTCG GGCGCTGCAT CACGCCTTCG AGCTAAATAA GGTGTAA
 
Protein sequence
MLEKRKLSGS KLFVKKFGGT SVGSIERIEV VAEQIAKSAH NGEQQVLVLS AMAGETNRLF 
ALAAQIDPRA SARELDMLVS TGEQISIALM AMALQRRGIN ARSLTGDQVQ IHTNSQFGRA
SIESVDTAYL TSLLSDGIVP IVAGFQGIDP NGDVTTLGRG GSDTTAVALA AALKADECQI
FTDVPGVFTT DPNIDSSARR LDVIGFDVML EMAKLGAKVL HPDSVEYAQR FKVPLRVLSS
FEAGHGTLIQ FGDESELAMA ASVQGIAINK ALATLTIEGL FTSSEHYQAL LACLARLEID
VEFITPLKLN ETSAAECVSF MLAEAKVDIL LHELELLSES LDLGQLIVER QRAKVSLVGK
GLQAKVGLLT KMLDVLGNET IHAKLLSTSE SKLSTVIDER DLHKAVRALH HAFELNKV