Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1195 |
Symbol | |
ID | 4258138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1394643 |
End bp | 1397228 |
Gene Length | 2586 bp |
Protein Length | 861 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638121816 |
Product | DNA mismatch repair protein MutS |
Protein accession | YP_737251 |
Protein GI | 114046701 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCCTA TAGATACCGA TGATTTAGAA AAACATACCC CTATGATGCG TCAATATTTG ACCATGAAAG CAGAGCATCA CGACATGCTG CTGTTTTATC GTATGGGTGA CTTCTATGAA CTCTTCTATG ATGACGCAAA ACGCGCCTCT GAATTATTGG GCATTTCCCT TACAGCCCGC GGCAAAAGCG GCGGAGACCC GATCCCGATG GCGGGAATTC CTTACCATGC GGTTGAAGGC TATCTCGCCA AATTGGTTCA AATTGGTCAA TCGGTCGCGA TCTGTGAGCA GATTGGCGAT CCCGCCACTT CAAAGGGCCC GGTTGAGCGA AAAGTGGTGC GCATCGTCAC CCCAGGTACT TTGACCGATG AAGCCCTATT ACAGGAGAGG CAGGACAATC TGTTAGCCGC GGTTTACCAA GGTAAAGTTG GTTTTGGCTA CGCTACCCTC GATGTGTCTT CCGGCCGCTT CGTGATTGCT GAATTAGAGA CAAAAGAGTC CCTCGAAGCC GAGCTACAAC GTACCAATCC GGTCGAAATT CTCTATAGCG AAGATTTTGA CGCTATGGAG TTATTGCATC ATTTTAAAGG CAAGCGTCGC CGCCCCGAGT GGGAGTTTGA TTACGATACC AGCATCAAAC TGCTGCTGGC ACAATTTGGC ACTAAGGATT TGCACGGCTT TGGGATTACC GATGCAAGGC TTTCGCTACA AGCGGCTGGC TGCTTAATGC AATATGTGAA AGACACCCAG CGCACCGCCC TGCCGCATAT CAATGCCATT ACCCGTTTCA ATCAAACCGA TACGATTGTC TTGGATGCGG CAACGCGCCG TAACCTCGAG CTGACACAAA ATTTGAGTGG TGGTCGAGAT AACACCTTAG CAGCCGTACT CGACAATACC GCCACAGCCA TGGGCAGCCG GATGTTGCAA CGCTGGATCC ATCAGCCGCT AAGGGACCAT GCCCAGATTT TTGCTCGCCA AACGGCCGTG AATGAATTGC TCGAGACCAC TGCCCATGAG TCATTGCATG AGCAGCTTAA AGCCCTAGGC GATATCGAAC GTATTATGGC AAGGCTGGCG CTGCGTACCG CTCGTCCAAG GGATTTTGCC CGCTTACGCC AAGCATTAAA CCTATTACCT CAGTTGCAGC AATCACTCGC GCAATTAAGT GCGCCCCATA CGGTGAAACT AGGCCAACTC TTAGGTGAGT TTCCCGAAGA GCAACAACTG CTTGAGCGCG CCATTGTCGA TAACCCGCCG ATGCTTATCC GTGACGGCGG CGTGATCCGT GAAGGCTACA ATGCCGAGTT AGATGAATGG CGAGGTTTAA GTGAAGGAGC CACTGATTAT CTAGTTCAGC TCGAGGCACG GGAAAAAGAG CGTACAGGCA TTGCCACGCT AAAGGTTGGC TACAACCGAG TGCATGGCTA CTACATCGAG GTCAGTCGCC TGCAATCGCA GCAAGTGCCG TTAAATTACC AGCGCCGTCA AACCCTTAAG AATATGGAGC GTTACATCAC GCCCGAGCTT AAGGAATACG AAGAAAAAGT GCTGTCGAGC CAAGGTAAAG CGCTCGCCCT TGAAAAACAA CTATGGGACG AATTGTTTGA TTTAATCCTC CCCAAGTTGC ATGAGCTACA AGCCTTCGCC AGAGCGGCAG CCGAGCTCGA TGTGCTGAGT AACTTTGCCG AACGTGCCGA AACCTTAGGG TATACTTGCC CAGAACTGAG CAGCGAAATC GGGGTAAAAA TCGAAGCGGG TCGCCACCCT GTAGTCGAGC GTGTGAGTCA AACGCCTTTT ATCGCCAACC CTGTCACCCT GCACAATCAA CGCCGGATGT TGATTGTTAC AGGTCCAAAC ATGGGCGGTA AATCGACCTA CATGCGCCAA GTGGCGCTTA TCACCCTAAT GGCACACATT GGCTGCTTTG TGTCAGCAGA TCGCGCCATT ATTGGTCCTA TCGATCGGAT TTTTACTCGG ATTGGCGCCT CAGACGATCT CGCCTCTGGT CGCTCAACCT TTATGGTGGA AATGACAGAA ACGGCAAATA TTCTCCATAA TGCAACTGCG CAAAGTTTAG TCTTGATGGA TGAAATTGGC CGTGGCACAT CAACCTACGA TGGCCTGTCA TTAGCCTGGT CTGCGGCTGA ATATTTAGCA CAGCAAATCG GCGCAATGAC GCTGTTTGCG ACCCATTATT TCGAGTTAAC ACAATTACCG GAACTCATGG CTGGCGTCTA TAACGTACAC CTTGATGCGA TTGAGCACGA GGACACCATC GCCTTTATGC ATGCAGTGCA AGAAGGTGCC GCCAGCAAGA GTTATGGTCT ACAAGTTGCG TCCCTTGCCG GGGTGCCTGC TCGGGTGATT AAGGCGGCAA AACACAAGTT ACATCAACTT GAGAGCCGCG ATCATCAAGT GGAAGGTGTT AATGTTAACG GCACTAGGGC ACCGATCCAA ACCCTGCTCG CCCTTCCTGA GCCGGTGGAG AATCCCGCTG TCAGCAAATT AAAAGCCATC AATCCCGATA ACCTGACCCC AAAACAGGCG CTGGATTTAC TCTACGAGCT AAAACGCTTG AGTTAA
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Protein sequence | MNPIDTDDLE KHTPMMRQYL TMKAEHHDML LFYRMGDFYE LFYDDAKRAS ELLGISLTAR GKSGGDPIPM AGIPYHAVEG YLAKLVQIGQ SVAICEQIGD PATSKGPVER KVVRIVTPGT LTDEALLQER QDNLLAAVYQ GKVGFGYATL DVSSGRFVIA ELETKESLEA ELQRTNPVEI LYSEDFDAME LLHHFKGKRR RPEWEFDYDT SIKLLLAQFG TKDLHGFGIT DARLSLQAAG CLMQYVKDTQ RTALPHINAI TRFNQTDTIV LDAATRRNLE LTQNLSGGRD NTLAAVLDNT ATAMGSRMLQ RWIHQPLRDH AQIFARQTAV NELLETTAHE SLHEQLKALG DIERIMARLA LRTARPRDFA RLRQALNLLP QLQQSLAQLS APHTVKLGQL LGEFPEEQQL LERAIVDNPP MLIRDGGVIR EGYNAELDEW RGLSEGATDY LVQLEAREKE RTGIATLKVG YNRVHGYYIE VSRLQSQQVP LNYQRRQTLK NMERYITPEL KEYEEKVLSS QGKALALEKQ LWDELFDLIL PKLHELQAFA RAAAELDVLS NFAERAETLG YTCPELSSEI GVKIEAGRHP VVERVSQTPF IANPVTLHNQ RRMLIVTGPN MGGKSTYMRQ VALITLMAHI GCFVSADRAI IGPIDRIFTR IGASDDLASG RSTFMVEMTE TANILHNATA QSLVLMDEIG RGTSTYDGLS LAWSAAEYLA QQIGAMTLFA THYFELTQLP ELMAGVYNVH LDAIEHEDTI AFMHAVQEGA ASKSYGLQVA SLAGVPARVI KAAKHKLHQL ESRDHQVEGV NVNGTRAPIQ TLLALPEPVE NPAVSKLKAI NPDNLTPKQA LDLLYELKRL S
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