Gene Shewmr7_1192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1192 
Symbol 
ID4258135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1391826 
End bp1392461 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content52% 
IMG OID638121813 
Productprotein-L-isoaspartate O-methyltransferase 
Protein accessionYP_737248 
Protein GI114046698 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2518] Protein-L-isoaspartate carboxylmethyltransferase 
TIGRFAM ID[TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGAG TTGCCTTAAC ATCGGCGGTG AATTTAGCTA AAAAGCTTCA GGAGGCGGGG 
ATCCGCCATC CAGCCGTTCT TAAGGCAATA TCCCATACCC CGCGCGAACT GTTTCTTGAT
AATGCGCTGG CCCATAAAGC CTACGAAAAT ACCGCCTTGC CCATAGGCCA AGGACAAACC
ATTTCGCAGC CGTATATTGT TGCACGTATG ACTGAGTTAC TGCTGCAACA TCAGCCGCAA
AAGGTGCTTG AGGTGGGGAC TGGCTCGGGC TACCAAGCGG CTATTCTCGC ACAACTGGTG
CCAGAACTGT GCACCATTGA GCGTATTAAA GGTTTACAGA TCCAAGCGAG ACAAAGATTA
AAGCGACTCG ATCTGCATAA TGTGTCATTC AAATATGGCG ATGGCTGGCA GGGCTGGCCG
AATCGCAGCC CTTTCGATGG CATTATGGTC ACGGCGGCAG CGGCTAAGGT TCCCGAAGCC
TTGTTGTCCC AGTTAGCCGA AGGCGGCGTG CTGATCATCC CTGTGGGTGA AGAGACGCAA
CAATTGATGC GCTTTACCCG CCGCTCGGAT CGTTTTAGTT CTGAAGTGAT AGAAACCGTC
AAATTTGTTC CCTTGGTCAA TGGCGAACTC GCTTAA
 
Protein sequence
MTRVALTSAV NLAKKLQEAG IRHPAVLKAI SHTPRELFLD NALAHKAYEN TALPIGQGQT 
ISQPYIVARM TELLLQHQPQ KVLEVGTGSG YQAAILAQLV PELCTIERIK GLQIQARQRL
KRLDLHNVSF KYGDGWQGWP NRSPFDGIMV TAAAAKVPEA LLSQLAEGGV LIIPVGEETQ
QLMRFTRRSD RFSSEVIETV KFVPLVNGEL A