| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1169 |
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| Symbol | |
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| ID | 4258287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 1359128 |
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| End bp | 1360003 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638121790 |
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| Product | UspA domain-containing protein |
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| Protein accession | YP_737225 |
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| Protein GI | 114046675 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0512262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.061235 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTTCC AGCATATTCT CGCTGCGGTT GATGATTCCG TTCCACCTAA TGCCGTGCTC
AAAAAGTCCG TTGTCTTGGC AAGAAAATGC CAAGCATCTT TGACTGTTCT CAAGGTCAAA
CGAACTCATA ACTTTAATCT AAACCTTTTA TTTCATAGAG ATAAATCCAA CCTCATGTCC
GATGACAGGC GAAAGCCCAT CTTGGCTTAT CCCGATAAAC AATATCCAAT CCAAATAAAA
GAATGCTTAT CCCACTCAAT ACACAATGCT ATTGTCAATG AATGTAACCA GTCAGATTAT
GATCTCATCA TAGTGAGTCA TAAATTCTAT CCACCCTTTT TCAATGAATT TTTAATTGCA
GATGAATGGC AATTGTTACG ATTACCCCAT ATTCCCGTGA TGTTTGTAGA TCTTGAAGAT
TGGCATGAGA ACGGCCACGT ACTCACAGCA CTAGAACTCG ACAATGAAAA CATCACTCAT
CTTGAGTTTA ATGAAACCCT GATAGAAGAA AGCAAACGGA TTGCCAGCCT GCTCTCGAAC
GATCTGCACT TAATTAATAG CTATTTACCC GATCCCTTCT ATATGAGCTT TAATCATCAG
CCGCAAGAGC AAGTCTCCGA GCGAGAAAAA TATAAGGCGA GACTTACGAC GGTAGCGCGG
CAGCACAATC TCAATACACA TAATCTACAC ATCGAAGAAG GCTTGCCAGA AGATACTATT
TCCACAGAAG CACGCAGGCT GAACGTTAAT ATGCTGGTAA TGGGCAGCGC AGAACGTAAA
GGCATGTTGA GTGCATTAAA AGGTAATGCA GCTCGAAATA TCATCAACAA GCTGCGAACC
GATCTCTTTA TCGTCAAACC AAGACACCCG CATTAA
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| Protein sequence | MPFQHILAAV DDSVPPNAVL KKSVVLARKC QASLTVLKVK RTHNFNLNLL FHRDKSNLMS
DDRRKPILAY PDKQYPIQIK ECLSHSIHNA IVNECNQSDY DLIIVSHKFY PPFFNEFLIA
DEWQLLRLPH IPVMFVDLED WHENGHVLTA LELDNENITH LEFNETLIEE SKRIASLLSN
DLHLINSYLP DPFYMSFNHQ PQEQVSEREK YKARLTTVAR QHNLNTHNLH IEEGLPEDTI
STEARRLNVN MLVMGSAERK GMLSALKGNA ARNIINKLRT DLFIVKPRHP H
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