Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1156 |
Symbol | |
ID | 4257801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1346300 |
End bp | 1347199 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638121777 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_737212 |
Protein GI | 114046662 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.415589 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACTAT TGAATAACCT AATCTTGGTC AGCTTCAAAC CCCAATTCGC CGCTGCAATG CTTGTGGCAG GAATGGCTAC GGCGCAGGCC GCACCTTTGC AAGTGAGCCA TTTTAATCCG GGTGAAAACA GCATCTTTGC CGTGTCCTCC AGCTTTATCA GTGGCGAGCA TGAAATGATG TTGGTCGATG CTCAGTTCCA AAAAAATGAT GCCCAGACCT TAGTGGATAC CATTAAGGCC AGCGGTAAAA AACTCACCTT GGTTTATATC AGCCACAGCG ATCCAGACTT TTACTTTGGG TTGGATGTGA TTAAGCAAAA CTTCCCCGAG GTAGAAATCG TCGCCACCCA AACCACTGTC GATGATATTA AAGCCTCGAT GGAGGGCAAG CTTGCCTACT GGGGACCGAT TTTAAAGGAC AATGCGCCGA GCCAATTAGT GCTGCCAAAG GTGGTGACAA CCAATAGCTT TAGTATCGAC GGTGAACAAG TGCTGATTGA AGGTCTAGAG GATACTCACC CTAAGCATAC CTTCCTGTGG GTACCTTCGG CTAAGACCAT CACTGGCGGA GTTGAAGTAT TTGATAATAC CCATGTTTGG ATAGCTGATA CCCAAAGTAT CGAGTCTCGC CAGGCTTGGT TAGCCCATTT GGATAAAATG AGTGCCCTCT CCCCCGAAAC AGTGATCCCT GGCCATTATC TTGGCAAGGC AAGATTTGAT CAGCGCGCGA TTAGCTTTAC CCGCGACTAT ATTCATGCCT TTGAAAATGC AGCTAAAACA GCAAAAAATT CTGCGGACTT AATCGCCAAG ATGCTCGCAC TCTACCCACA AATCCCCAGC GATGTGAGCC TTGAGATCAG CGCTAAAGTC ATTATGGGCG AAATGCGCTG GCCCATGTAA
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Protein sequence | MTLLNNLILV SFKPQFAAAM LVAGMATAQA APLQVSHFNP GENSIFAVSS SFISGEHEMM LVDAQFQKND AQTLVDTIKA SGKKLTLVYI SHSDPDFYFG LDVIKQNFPE VEIVATQTTV DDIKASMEGK LAYWGPILKD NAPSQLVLPK VVTTNSFSID GEQVLIEGLE DTHPKHTFLW VPSAKTITGG VEVFDNTHVW IADTQSIESR QAWLAHLDKM SALSPETVIP GHYLGKARFD QRAISFTRDY IHAFENAAKT AKNSADLIAK MLALYPQIPS DVSLEISAKV IMGEMRWPM
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