Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1100 |
Symbol | |
ID | 4258671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1269887 |
End bp | 1271146 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638121721 |
Product | nucleoside transporter |
Protein accession | YP_737156 |
Protein GI | 114046606 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1972] Nucleoside permease |
TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000101153 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000254337 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAATATAT TGATGAGCTT AGTAGGGGTG GTCGTCCTAC TTGCGATAGG TTTCCTCCTA TCGAATAACA AAAAAGCAAT TAACTTGCGT ACTGTGGGTG GTGCATTAGC CATCCAGGCT GCCTTCGGTG GGTTTGTTCT GTACATTCCT GTCGGTAAAG ATATCCTGAA AAGTGTATCT GACGCGGTTT CTAGCGTTAT CGGTTATGCA CAAAACGGTA TCGGCTTCCT GTTCGGCGAT TTAGCTAACT TCAAACTTGG CTTTATCTTC GCAGTAAACG TGTTGCCAGT TATTGTGTTC TTCTCTTCTC TGATCGCCGT TCTGTACTAC TTGGGCATCA TGCAGTGGAT CATCCGTATC ATCGGTGGTG GTCTGCAAAA AGCATTAGGC ACAAGCCGTA CTGAATCTAT GTCTGCGACT GCTAACATCT TCGTTGGTCA AACAGAAGCG CCGTTAGTGG TTCGTCCATT CATTCCAACT ATGACTCAAT CAGAACTGTT TGCGATCATG GTGGGTGGTT TAGCTTCTAT CGCAGGTTCA GTACTTGCCG GTTACGCGCA AATGGGCGTG CCTATTGAGT ACTTAGTTGC TGCGTCATTC ATGGCGGCAC CAGGTGGTCT ATTAATGGCT AAACTGATGC ACCCAGAAAC GGAAGCTGCT AAAAACGACA TGGACGAATT ACCAGAAGAT CCTGATAAGC CAGCTAACGT ATTAGACGCT GCTGCTGCGG GTGCTTCATC TGGTATGCAC TTAGCATTAA ACGTTGGTGC AATGCTGTTA GCCTTCGTTG GTTTGATCGC TATGATCAAC GGCATCATCG GTGGCGTGGG TGGCTGGTTC GGTGTTGAAG GTTTAACACT GGAACTGATC CTTGGTTACA TCTTCATGCC GTTAGCCTTC TTAATCGGTG TACCTTGGAA CGAAGCGCTG GTTGCTGGTT CTTTCATCGG TCAGAAAATC GTTGTTAACG AATTCGTTGC TTACCTGAAC TTTGCGCCAT ACCTAAAAGA CATCGCTGAT GGCGGTATGG TTGTCGCTGA AACTGGCTTA GCAATGACTG ACAGAACTAA AGCGATTATT TCGTTTGCAC TGTGTGGTTT CGCTAACTTG TCTTCAATTG CGATTCTGCT CGGTGGTTTA GGTGCTATGG CTCCTAACCG TCGTCACGAT TTAGCTAAGT TAGGTATCCG TGCTGTTATC GCTGGTTCTT TAGCTAACTT AATGAGTGCA ACAATTGCAG GTCTGTTCTT AGCTATCTAA
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Protein sequence | MNILMSLVGV VVLLAIGFLL SNNKKAINLR TVGGALAIQA AFGGFVLYIP VGKDILKSVS DAVSSVIGYA QNGIGFLFGD LANFKLGFIF AVNVLPVIVF FSSLIAVLYY LGIMQWIIRI IGGGLQKALG TSRTESMSAT ANIFVGQTEA PLVVRPFIPT MTQSELFAIM VGGLASIAGS VLAGYAQMGV PIEYLVAASF MAAPGGLLMA KLMHPETEAA KNDMDELPED PDKPANVLDA AAAGASSGMH LALNVGAMLL AFVGLIAMIN GIIGGVGGWF GVEGLTLELI LGYIFMPLAF LIGVPWNEAL VAGSFIGQKI VVNEFVAYLN FAPYLKDIAD GGMVVAETGL AMTDRTKAII SFALCGFANL SSIAILLGGL GAMAPNRRHD LAKLGIRAVI AGSLANLMSA TIAGLFLAI
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