| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1098 |
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| Symbol | prfC |
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| ID | 4258669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 1267102 |
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| End bp | 1268682 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638121719 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_737154 |
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| Protein GI | 114046604 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00192369 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000319314 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGTCAGACA ATAAAGTAGA GGTCGATAAA CGTCGCACCT TCGCGATTAT ATCGCACCCC
GACGCGGGTA AAACCACCAT TACCGAAAAA GTGCTGTTAT TCGGAAACGC GCTGCAGAAA
GCGGGTACCG TTAAGGGCAA AAAATCGGGT CAGCATGCTA AGTCTGACTG GATGGAAATG
GAAAAAGACC GTGGTATTTC GATTACTACG TCTGTCATGC AGTTCCCCTA TGGTGGCGCG
CTCGTTAACC TACTCGACAC TCCCGGCCAC GAAGACTTCT CGGAAGATAC TTACCGCACC
TTAACGGCGG TAGACTCTTG CTTGATGGTT ATCGACTCGG CAAAAGGGGT TGAGGACCGT
ACCATCAAAT TGATGGAAGT CACGCGTCTG CGCGATACGC CTATCGTGAC CTTTATGAAC
AAACTCGACC GTGATATTCG CGATCCTATC GAACTGATGG ACGAGGTTGA AGATGTTCTC
AATATCGCCT GTGCGCCTAT CACTTGGCCT ATTGGTAGTG GTAAAGAGTT TAAAGGTGTT
TACCATATTC TGCGTGATGA AGTGGTACTG TACCAGAGCG GTATGGGACA CACGATTCAA
GAGCGCCGTG TGATTGAAGG CATCGATAAC CCTGAGCTGG ATAAAGCGAT CGGTAGTTAT
GCTGCTGATT TACGTGACGA AATGGAGCTG GTGCGCGGTG CATCCAACGA ATTTGATCAC
CAAGCTTTCT TAAAGGGTGA GCTCACGCCA GTCTTCTTCG GTACCGCATT GGGTAACTTC
GGTGTTGACC ATATCCTCGA TGGTATTGTG GAGTGGGCGC CAAAGCCGCT ACCTCGTGAA
AGCGATGCGC GGATGATCAT GCCTGACGAA GAAAAATTCA CCGGTTTTGT GTTTAAAATC
CAAGCTAACA TGGATCCTAA ACACCGTGAC CGCGTTGCCT TTATGCGCGT TTGCTCTGGT
CGCTATGAGC AAGGCATGAA GATGCACCAT GTGCGCATCG GTAAAGATGT TAACGTCAGC
GATGCCTTGA CCTTTATGGC GGGTGACCGT GAGCGCGCCG AAGTGGCGTA TCCTGGTGAT
ATTATTGGTT TGCATAACCA TGGGACAATC CGTATCGGTG ATACTTTCAC TCAAGGTGAA
AAGTTCCGCT TTACCGGTGT GCCTAACTTT GCGCCAGAAA TGTTTCGCCG TATTCGTCTG
CGGGATCCGC TCAAGCAAAA ACAATTGCTT AAGGGCCTAG TACAATTGTC TGAAGAAGGC
GCCGTACAGG TGTTCCGTCC ATTAGACACC AACGATCTAA TCGTCGGCGC CGTGGGTGTA
CTGCAGTTTG AAGTGGTTGT CGGCCGCTTA AAGAGCGAGT ACAACGTTGA AGCGATTTAC
GAAGGTATTA GCGTTTCAAC GGCACGCTGG GTTTATTGTA AAGATGAGCG TAAGCTAGAA
GAGTTCCGCC GTAAGTGTAG CCAAAACTTG GCACTCGATG GTGGTGATAA CTTAACTTAC
ATTGCGCCAA CTATGGTTAA CTTAAACCTT TCGATGGAAA GATACCCTGA TATCGAGTTC
GCTAAGACGC GCGAACACTA G
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| Protein sequence | MSDNKVEVDK RRTFAIISHP DAGKTTITEK VLLFGNALQK AGTVKGKKSG QHAKSDWMEM
EKDRGISITT SVMQFPYGGA LVNLLDTPGH EDFSEDTYRT LTAVDSCLMV IDSAKGVEDR
TIKLMEVTRL RDTPIVTFMN KLDRDIRDPI ELMDEVEDVL NIACAPITWP IGSGKEFKGV
YHILRDEVVL YQSGMGHTIQ ERRVIEGIDN PELDKAIGSY AADLRDEMEL VRGASNEFDH
QAFLKGELTP VFFGTALGNF GVDHILDGIV EWAPKPLPRE SDARMIMPDE EKFTGFVFKI
QANMDPKHRD RVAFMRVCSG RYEQGMKMHH VRIGKDVNVS DALTFMAGDR ERAEVAYPGD
IIGLHNHGTI RIGDTFTQGE KFRFTGVPNF APEMFRRIRL RDPLKQKQLL KGLVQLSEEG
AVQVFRPLDT NDLIVGAVGV LQFEVVVGRL KSEYNVEAIY EGISVSTARW VYCKDERKLE
EFRRKCSQNL ALDGGDNLTY IAPTMVNLNL SMERYPDIEF AKTREH
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