Gene Shewmr7_1085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1085 
Symbol 
ID4257992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1250973 
End bp1251806 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content50% 
IMG OID638121704 
Productdihydropteroate synthase 
Protein accessionYP_737141 
Protein GI114046591 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0294] Dihydropteroate synthase and related enzymes 
TIGRFAM ID[TIGR01496] dihydropteroate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00216639 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0692827 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTGAAT TAATTGCTGG AACCAAACGC TTATCCTTAG CTTCGCCCGT CGTGATGGGC 
ATTCTGAATG TTACTCCAGA TTCTTTTTCC GACGGTGGAA AGTTCTCTTC CTTTGAATTA
GCTTGTCAGC ATGCCGATGA CATGGTGGCC CAAGGTGCGC TTATCATCGA TATCGGTGGC
GAGTCGACAA GACCGGGTGC GGCCGATGTG ACGGTTGAGG ATGAACTCGC CCGTGTGATC
CCTCTGGTGG AATATGTCGC TAAACATCAT GATGTGTGGA TTTCAGTCGA TACCAGTAAA
CCTGAAGTGA TGCGACAAGC GGTGAATGCT GGCGCGCATT TAATCAACGA TGTGCGTGCC
TTGCAGGAAC CTGGGGCATT AGAGATTGCG GCTCAGCTGA ATGTGCCCAT CTGTTTAATG
CACATGCAGG GCGCGCCGCG CAGTATGCAA ATGGCGCCGG AATACCAGGA CGTTGTTGCC
GATGTTTCTG AGTTTTTGTG TGAGCGTATT CAAGCCTGCA TCGATGCAGG GATCCCGCGA
GAGCGATTGT TAATCGACCC GGGTTTTGGT TTTGGTAAAA CCTTAGAACA TAACTATGAA
CTGCTGGCGA AGTTAGAGCG TTTTGCGCAG TTTGAATTGC CGATATTGAT AGGTTTATCC
CGTAAGAGCA TGATAGGAAA CCTTCTCGCT AGACCGACCT CCGAGCGTCT AGCGGGGAGC
CTTGCTGGCG CCATGATAGC GGCCCAGAAA GGGGCACATA TCATTCGTGT CCATGATGTC
TCTGAAACTG TCGATATGTT GAAAGTGTTA CAAGCGACAC AGGCATATCT TTAA
 
Protein sequence
MFELIAGTKR LSLASPVVMG ILNVTPDSFS DGGKFSSFEL ACQHADDMVA QGALIIDIGG 
ESTRPGAADV TVEDELARVI PLVEYVAKHH DVWISVDTSK PEVMRQAVNA GAHLINDVRA
LQEPGALEIA AQLNVPICLM HMQGAPRSMQ MAPEYQDVVA DVSEFLCERI QACIDAGIPR
ERLLIDPGFG FGKTLEHNYE LLAKLERFAQ FELPILIGLS RKSMIGNLLA RPTSERLAGS
LAGAMIAAQK GAHIIRVHDV SETVDMLKVL QATQAYL