| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1066 |
|---|
| Symbol | |
|---|
| ID | 4257326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 1230612 |
|---|
| End bp | 1231487 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638121678 |
|---|
| Product | CBS domain-containing protein |
|---|
| Protein accession | YP_737122 |
|---|
| Protein GI | 114046572 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4535] Putative Mg2+ and Co2+ transporter CorC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.354605 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0599682 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACG ATATCCCCCC GAGTACGAGC GCCCAAAAGA AAGGCTGGTT TGACAGAGTA
AGCCAGTTAT TTCAGGGCGA ACCTCAAAAT CGTGAAGACT TAGTCGATGT GATTGATGGC
GCAGAGCAGC GCGAGTTAAT CACCGAAGAC ACCCGCGAAA TGATCAAAGG TGTATTAGAA
GTTTCTGATA TGCGTGTTCG GGATATTATG ATCCCGCGTG CTCAAATTGT CGCAATACAA
ATCGACAATA CCGTCGAAGA GTTGCTCGCA ACTGTTATCG GTTCAGGCCA TTCTCGCTTC
CCTGTGGTTA ACGAAGATAA GGACCATATC GAAGGCATTT TACTGGCTAA AGATTTGATC
CCTTATGGTT TTTCAAACAG TGACGAACCC TTCTCCCTTG AGCGCGTGAT CCGCCCCGCC
GTCGTTGTGC CAGAGAGCAA ACGCGTCGAC GTGTTACTCA AAGAATTCCG CTCCCAGCGT
TACCATATGG CGATTGTCGT CGACGAATAC GGCGGAGTAT CGGGTCTAGT GACCATTGAA
GATATTCTCG AAGAAATCGT CGGTGAGATT GAAGACGAAT TCGACCACGA TAGCCCTGAA
GACACTGAGA TCCGCAAGGT CGGCAACACT GTCTACATGG TAAAAGCGTT GACGCCTATC
GAGGATTTTA ACGAAGAATT CAATACTCAC TTCAGCGATG AAGAGTTTGA TACCGTCGGT
GGTTTAGTGT CCCATGCCTT TGGTCATCTA CCAGAGCGTA ATGAGAGCAT TATGATCGAA
GGAATTGAAT TTAAAGTCAT CAATGCCGAT ACCAGACGCT TAATCCAACT CAGAGTTAAA
CTCCCCGACC CCAATGTCGG TGAAGACGTA GAATAA
|
|---|
| Protein sequence | MSDDIPPSTS AQKKGWFDRV SQLFQGEPQN REDLVDVIDG AEQRELITED TREMIKGVLE
VSDMRVRDIM IPRAQIVAIQ IDNTVEELLA TVIGSGHSRF PVVNEDKDHI EGILLAKDLI
PYGFSNSDEP FSLERVIRPA VVVPESKRVD VLLKEFRSQR YHMAIVVDEY GGVSGLVTIE
DILEEIVGEI EDEFDHDSPE DTEIRKVGNT VYMVKALTPI EDFNEEFNTH FSDEEFDTVG
GLVSHAFGHL PERNESIMIE GIEFKVINAD TRRLIQLRVK LPDPNVGEDV E
|
|---|
| |