Gene Shewmr7_1065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1065 
Symbollnt 
ID4257325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1229010 
End bp1230569 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content52% 
IMG OID638121677 
Productapolipoprotein N-acyltransferase 
Protein accessionYP_737121 
Protein GI114046571 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0815] Apolipoprotein N-acyltransferase 
TIGRFAM ID[TIGR00546] apolipoprotein N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0720615 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTAACTA ACATTCGGGC TTTTGCCCAA CAAAAGTCCC GACTGAGCGT GTTACGGCTC 
GTGCTGGCGT TTATTTTAGG CGCCAGTACG GCGCTTTCCT TTGCCCCTTA TTCCTTGTGG
ATTATCTATC CCGTCGCCAT GGCCTTAGCC CTGTGGCTGA GTGGCTCCTT GGCTCCTAAA
GCCAGCTTCT TCCATTGGTT AAGCTTTGGT TTTGGCTGTT TTGCCGTTGG GATCAGTTGG
GTGCATGTCA GTATGGACAC CTTCGGTGGC CTCCCCTTGG CCGCCTCAGT GGGGCTAATG
GCACTGTTAG CCCTCTATTT AGCCCTCTAT CCAGCCTTAA CGGGTCTCGG TTTAGCGTGG
TTGACTCGCA CTAATACTTC GTCTACTCCG TCGCTATGGC GTAACCTGCT CCTCTTCCCC
GCGCTTTGGG TCTTAACCGA ATGGGCTAGA GGCTGGGTGA TGACAGGGTT TCCCTGGATC
TGGGCTGGTT ACTCCCAAAC CCAAGGTCCA TTAAAGGAAC TCGCGAGTAT TATTGGTGCC
CTAGGACTCA GTTTCTTAAT TGCGATGCTC GCGGGCGCCT TAGCCCTGTG TTTTAGCAAG
CGCTACAAGA GCCTGTTGGT TTTACTGCCC ATCATCACAG CTGCGGCTTG GGTTGCGCCA
AAGCTAACGC AGATCAAGCC GACAGGCGAG TCAGTCAAAG TTGCACTAGT GCAGGGAAAC
ATTCCCCAAA GTATGAAATG GGAACCCGAG GCGCTCTGGC CAACCCTATT GAAATACATG
GATTTATCCC GTGAGCACTT CGACGCTGAC ATTATCGTCT GGCCAGAAGC CGCGATCCCA
GCGCCAGAAT CTATGGTGCA AGACTTTTTG GATAATGCTA ACAAGGTTGC CAATCTTAAC
CACACCTCCA TCATCACGGG GATTATTAGC CGTCAACAGA ACGAGTTTTA TAACTCTTTG
ATAGTGCTAG GTAACCATAA TCAGAAGCAG CAAGATACGC CGGATTATGA GAGCGATGGC
AGCAACCAGT TTAAGAAACA CCATCTACTG CCTATCGGCG AGTTTGTGCC CTTTGAAGCC
TTACTGCGCC CGATTGCACC TTTCTTCAAT CTGCCAATGT CCTCCTTCGC TCGGGGCGAT
TATCAACAGC CGAACTTGAG CGCCGTAGGC CATAAAATTG CTCCGGCAAT TTGTTATGAA
ATCGCCTTCC CAGAGCAGCT GCGTGACAGT GTTAACCTCG GCACCGATCT GCTGTTAACC
GTATCGAACG ATGCATGGTT TGGCACCTCA AATGGGCCGT TGCAGCATAT GGAAATCGCC
CAAATGCGCG CCATCGAATT GGGCCGTCCG CTAGTGCGCG CCACCAACAA CGGCGTGACC
GCGGTAGTTG ATGAGAAAGG CAATATCACA GCTGCACTAC CGCAATTCGA AACGGGCGTA
CTGAGCGCGA CGATTCCACT GGTGACAGGC CAAACTTGGT TTGCCAAAAT CGGCCAAACA
CCACTGCTAC TGCTTTGTGG TGCGCTGCTG TTAGTCGGGT TTATTCGTCG TAAAAAATAA
 
Protein sequence
MLTNIRAFAQ QKSRLSVLRL VLAFILGAST ALSFAPYSLW IIYPVAMALA LWLSGSLAPK 
ASFFHWLSFG FGCFAVGISW VHVSMDTFGG LPLAASVGLM ALLALYLALY PALTGLGLAW
LTRTNTSSTP SLWRNLLLFP ALWVLTEWAR GWVMTGFPWI WAGYSQTQGP LKELASIIGA
LGLSFLIAML AGALALCFSK RYKSLLVLLP IITAAAWVAP KLTQIKPTGE SVKVALVQGN
IPQSMKWEPE ALWPTLLKYM DLSREHFDAD IIVWPEAAIP APESMVQDFL DNANKVANLN
HTSIITGIIS RQQNEFYNSL IVLGNHNQKQ QDTPDYESDG SNQFKKHHLL PIGEFVPFEA
LLRPIAPFFN LPMSSFARGD YQQPNLSAVG HKIAPAICYE IAFPEQLRDS VNLGTDLLLT
VSNDAWFGTS NGPLQHMEIA QMRAIELGRP LVRATNNGVT AVVDEKGNIT AALPQFETGV
LSATIPLVTG QTWFAKIGQT PLLLLCGALL LVGFIRRKK