Gene Shewmr7_1059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1059 
Symbol 
ID4257319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1222948 
End bp1223586 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content50% 
IMG OID638121671 
Productnicotinate-nucleotide adenylyltransferase 
Protein accessionYP_737115 
Protein GI114046565 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1057] Nicotinic acid mononucleotide adenylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain
[TIGR00482] nicotinate (nicotinamide) nucleotide adenylyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00052285 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00620906 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTATCG GTATTTTAGG CGGCACCTTC GACCCCATAC ATTACGGCCA TATTCGCCCC 
GCGATGGAAG TCAAAGCCAG TCTCAAGCTG GATAAAATCC TGCTGATGCC CAACCATATT
CCGCCGCATA AAAACACCAC CCACTCGAGT ACAGCGCAGC GGCTCGAAAT GGTCGCGCAG
GTATGTGAGG CATTAACCGG TTTTGAGCTC TGTGATATCG AAGCTAAACG TGACAGCCCA
TCCTATACGG TTGTCACCCT TAAGCAACTA AGTCGGCTTT ATCCCGATGA CGAACTGTTT
TTTATCATGG GGATGGATTC ATTTATTCAC CTGCAAAGCT GGCACAAATG GCAGCAACTG
TTTGAATTAG CCAATATTGT GGTATGCCAG CGCCCGGGCT GGCATTTAGC CGAAGGGCAC
CCAATGCAGC ATGAGCTAAA CGTACGTCAC GCAACGCTTG AAGCCTTAAG TCACTCAAGC
GCGCCGCAAC ATGGGCGCAT CTTTACCGTC GACATCAGCC CACAGGATAT TTCATCCACC
CAAATTCGCT CACTGCTGGC CATGGGGGAA ATTCCACAGG ACGCCCTCCT ACCCGTCACT
CTAAATTACA TTCAAAAACA ACGGCTTTAT TTTTCCTAG
 
Protein sequence
MRIGILGGTF DPIHYGHIRP AMEVKASLKL DKILLMPNHI PPHKNTTHSS TAQRLEMVAQ 
VCEALTGFEL CDIEAKRDSP SYTVVTLKQL SRLYPDDELF FIMGMDSFIH LQSWHKWQQL
FELANIVVCQ RPGWHLAEGH PMQHELNVRH ATLEALSHSS APQHGRIFTV DISPQDISST
QIRSLLAMGE IPQDALLPVT LNYIQKQRLY FS