Gene Shewmr7_1058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1058 
Symbol 
ID4257318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1222501 
End bp1222845 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content48% 
IMG OID638121670 
Productiojap-like protein 
Protein accessionYP_737114 
Protein GI114046564 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000229081 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00601071 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGGTACA TCAGCGTGCA GAGCGCCGAA TTAAAGCAGT TTGTTGTCGA CAAAATCGAC 
GATTTAAAAG CCCGTGACGT CGTGGTTATC GATGTCAGCA ACCAATCTAA CATCACCGAC
TATATGGTGA TTTGTTCAGG TACATCTAAA ACTCACGTGA AAGCGATCGC CGAAAACCTC
GTGCTCGAAG CGAAAGCCGC TGGCATTCCA CCAATTGGTA TCGAAGGCCG CGACAGCAGC
GAATGGGTAT TGGTGGATAT GGGCAACGTG ATCCTGCATG TTATGCAAGA CCAAACCCGC
GATTTCTACC AGCTTGAAAA GCTCTGGTCA GAAAAGCAAG CCTAA
 
Protein sequence
MRYISVQSAE LKQFVVDKID DLKARDVVVI DVSNQSNITD YMVICSGTSK THVKAIAENL 
VLEAKAAGIP PIGIEGRDSS EWVLVDMGNV ILHVMQDQTR DFYQLEKLWS EKQA