Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1009 |
Symbol | |
ID | 4255695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1167151 |
End bp | 1168032 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638121620 |
Product | hypothetical protein |
Protein accession | YP_737065 |
Protein GI | 114046515 |
COG category | [S] Function unknown |
COG ID | [COG3220] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.672534 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATAAAC AGCGTCTCAC TCACCCTACC CTAGGTTTTG GTTTAGGACT GCGAACCCAG CACTTCGACC ATGTGCTTAG GCATCAACCC GAGGTCGACT GGTTCGAGAT ACTCTCGGAA AACTTTATGG TCGCGGGCGG AAAACCTCGC TATTACCTGA GTGAGATTGC CGAGCGTTAT CCACTGGTGA TGCACGGCGT TTCTTTATCC ATCGGCAGCA CAGATCCGCT GAATATGGAT TATCTCAAGG CGCTCAAACA ACTCGCGAAT GAAGTGCAGC CCCAATGGAT TTCGGATCAT ATTTGCTGGA CCTCCATCCA CGGTATCAAT AGCCATGACT TACTGCCCCT ACCCTACACC GAGGAAACAG TGAGACACGT GGCCGAGCGC ATCGGCATAG TACAGGACTT TTTAGGCCGC CGCATTTTGA TGGAGAACGT CTCCAGCTAT TTGTCCTACC AAGATTCCAC CATGAATGAG TGGCAATTTG TTAATGCGGT AGCCGAGGAG GCTGATTGCC TATTGCTGTT AGACATTAAC AACATCTATG TCAGCGCCCG TAACCATCAG TTCCCTCCTG AGGATTATCT GCTGCAAATC GCGCCTAACC GGGTGCAACA ATTTCACCTA GCGGGCCACT CGGATTACGG CGACTATGTT ATCGACACCC ATGATCACGA CGTTTGCCCC AGTGTCTGGG AGCTGTATCG GCAGGCATTA ACCCGCTTTG GTGGTGTCAG CACTATGATT GAGCGCGATG CCAATATCCC CGAATTTAAT GCATTGGAAG CCGAGTTGGC GATTGCCCGT AACATCGCCC GCATCACGTT AGGCGAGTCA CATCCTCTGG TTTACAGACC GCGGCAGGAG ACGGTGGCAT GA
|
Protein sequence | MDKQRLTHPT LGFGLGLRTQ HFDHVLRHQP EVDWFEILSE NFMVAGGKPR YYLSEIAERY PLVMHGVSLS IGSTDPLNMD YLKALKQLAN EVQPQWISDH ICWTSIHGIN SHDLLPLPYT EETVRHVAER IGIVQDFLGR RILMENVSSY LSYQDSTMNE WQFVNAVAEE ADCLLLLDIN NIYVSARNHQ FPPEDYLLQI APNRVQQFHL AGHSDYGDYV IDTHDHDVCP SVWELYRQAL TRFGGVSTMI ERDANIPEFN ALEAELAIAR NIARITLGES HPLVYRPRQE TVA
|
| |