| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0980 |
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| Symbol | |
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| ID | 4256527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 1127983 |
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| End bp | 1129107 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638121591 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_737036 |
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| Protein GI | 114046486 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.84365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGAGTA AAGCTCTCAT CTGCAACTTT TGCATTAAAG GGCATCCAAA AGAGTTGTTA
GTCACTATGT TTAAAACCCT AGCGTTAAAA ACCCCCGTGT TAAAAACCTC AGTGTTAAAG
CATTCAGTGA ACTGGCTGGT CCTTGTAGGT CTAGCCTTTT TTATTTCAGC CTGTAGCAAA
CAGGATGAGG TTATCTCCCT CGCGGGCAGC ACAATGGGCA CGACCTACCA CATTAAAGTG
GTTCCCAATG AGCAAATGCC GACGGCCCAG TTGTTGCAGG CCGAAATTGA CTTAGCACTC
GAGCAAGTCA ATAACCAAAT GTCGACCTAT CGACCTAATT CAGAACTGTC TCGTTTCAAT
CAGTTACCGC TCGAGCAAAG CGTTGAAGTG TCGCCGGATA CCATCAAAGT GGTTAAAGAA
GGCATGCGTT TGTATAACGT GACAGACAAA GCCTTAGACA TTACCTTAGG GCCGCTGGTG
AACCTATGGG GATTTGGCCC CGATAAACGC CCAACCAAAG TGCCGACTCA GGCCGATATC
GATGCAGCTA AAGCCAAAAC GGGTATTAGT GAACTTTCGA TAGAAGGTCA TCGTTTAAGT
AAGCATAACG CGCATTTGTA CGTAGACCTG TCATCAATCG CCAAAGGGTT TGGGGTTGAT
AAAGTCGCTT CTATTCTCGA TAAATACCAC GCGACTGGGT ATTTAGTTGA AATTGGCGGT
GAGCTGAGCA TTAAAGGTGC TAAAGGCGAT GGTAGCTCGT GGCGCGTCGC GATAGAGAAA
CCGACCGATG ATGGCATGGC GGTGCAGCAG GTGATTGAGC CTGGCACTAT GGCGATGGCA
ACGTCGGGGG ATTATCGCAA TTATTATGAG GAAGAAGGTC AGCGTTTTAC TCATATAATT
GATCCACGTA CCGGTTTGCC TATTAATCAT AAGCTAGCAT CTGTGACCGT TTTGCATAAG
GAATGTATGA CGGCCGATGG TTTTGCGACG GCGATGATGG TTTTAGGCAC AGAAGCGTCA
TTGGAGCTTG CCAAGAAAGA ACACTTGGCG ATAATGCTAA TAGAAAAGCA AGGCGAAGGA
TTTAAAGTCT ACTACAGTGA CGCCTTCAAG CCTTTCCTTA AGTAG
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| Protein sequence | MWSKALICNF CIKGHPKELL VTMFKTLALK TPVLKTSVLK HSVNWLVLVG LAFFISACSK
QDEVISLAGS TMGTTYHIKV VPNEQMPTAQ LLQAEIDLAL EQVNNQMSTY RPNSELSRFN
QLPLEQSVEV SPDTIKVVKE GMRLYNVTDK ALDITLGPLV NLWGFGPDKR PTKVPTQADI
DAAKAKTGIS ELSIEGHRLS KHNAHLYVDL SSIAKGFGVD KVASILDKYH ATGYLVEIGG
ELSIKGAKGD GSSWRVAIEK PTDDGMAVQQ VIEPGTMAMA TSGDYRNYYE EEGQRFTHII
DPRTGLPINH KLASVTVLHK ECMTADGFAT AMMVLGTEAS LELAKKEHLA IMLIEKQGEG
FKVYYSDAFK PFLK
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