Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0965 |
Symbol | |
ID | 4255599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1108734 |
End bp | 1110146 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638121576 |
Product | GntR family transcriptional regulator |
Protein accession | YP_737021 |
Protein GI | 114046471 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAAAT ACCAGCAGTT AGCGCAGGAT CTCAAAAACC GAATCACCCA AGGTGTCTGG CAGGCAGGGG ATAAACTGCC CTCATTGCGG CAAACCGTGT CTGATTCGGG GCTGAGTTTA ATGACAGTGC TGAACGCCTA TCAATTACTC GAAAGCCAAG GCGTGATATT GGCGCAGGCA AAATCGGGTT ACATAGTAGC GCCTCAGCCT GAAGTCTTTC GTTACCCAGA GACGCAAAGA CAGATCTATT TCTCCGATAA GGTCGATATT AACGAGTTTG TGTTTAGCGT ATTACAGGCA TCGAAACAGG CTGGGATTGT GCCCTTTGGC TCGGCATTTC CCGATCCCAG TTTATTTCCA CAGCAAGCCT TGGCACGCTC GCTGGTTAAG GTCACTCGGC AGATGTCACC GTCGTTTGCG GCCGATAATC TTCCCCCTGG CAATGCTGGG TTACGCAAGG CGATTTCCCA ACGTTATGCC AAGTTAGGCA TGAGCGTCTC GCCCGATGAA ATTTTGATTA CCTCGGGGGC GATGGAGGCG CTGAACTTGA GCTTAGCGGC GCTGACTCAG GCGGGAGACT GGGTTGTGAT TGAATCGCCC GCTTTTTATG GCGCAATGCA AGCCATTGAG CGACTCAAAC TGAGGGCGAT TGCTGTCGCG ACGGATCCCC GCGAAGGGAT TGATCTTAAC GCCTTGGCTG AAGTGTTGAA GAGCTATCCT GTCAAAGCCT GTTGGTTGAT GAGTCTACAT CAAAATCCCT TAGGCTGTAG TTTATCGGAA CAGAAAAAAC AGGCGGTTTA TCAACTACTT TGTGAGCATC ATGTCAGCCT GATTGAAGAT GATGTGTATC AGGAGCTTTA TGTCGGTTCG AGTGCGCCTA GGCCGATTAA AGCCTTAGAT ACCCAAGGCT GCGTACTGCA TTGTGGCTCT TTTTCTAAAT CCTTGATCGC AGGATATCGA GTCGGTTGGG TTGCCGCAGG GCGCCATGCT CCGCAATTGC AACGGTTGCA GTTAATGTCG ACCCTCTCAA CCAGTGCGCC TATGCAACTG GCCATCGCCG ATTTTATTCA GTCGCCCCAA TATGAGCGTC ATTTAAAGCG CTTACGCCAC ACCTTAGCGG ATCGCAAATT TGCCATGTAT CAGTTACTGC GGGCTCACTT ACCGGAGTCC GTGAGTGTGA ACTTTGAGCC GGGCGGTTAT TTCCTCTGGT TGGCATTGCC TGCCCATATG GATGCGACGC AGATATACCA TAGCGCGCTT GAGCGAGGGA TCAGTATTGC GCCGGGGAAT CTCTTTAGTA ATCAAGCAGA ATTTCGCCAT TTTATGCGCA TTAATGCCTC CTACGACTGT TCATCTGAGA TAGTGCGTGC GGTAAAAGCG CTCGCGCAAC TCCTCTATCA CTCCCCGAAT TGA
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Protein sequence | MSKYQQLAQD LKNRITQGVW QAGDKLPSLR QTVSDSGLSL MTVLNAYQLL ESQGVILAQA KSGYIVAPQP EVFRYPETQR QIYFSDKVDI NEFVFSVLQA SKQAGIVPFG SAFPDPSLFP QQALARSLVK VTRQMSPSFA ADNLPPGNAG LRKAISQRYA KLGMSVSPDE ILITSGAMEA LNLSLAALTQ AGDWVVIESP AFYGAMQAIE RLKLRAIAVA TDPREGIDLN ALAEVLKSYP VKACWLMSLH QNPLGCSLSE QKKQAVYQLL CEHHVSLIED DVYQELYVGS SAPRPIKALD TQGCVLHCGS FSKSLIAGYR VGWVAAGRHA PQLQRLQLMS TLSTSAPMQL AIADFIQSPQ YERHLKRLRH TLADRKFAMY QLLRAHLPES VSVNFEPGGY FLWLALPAHM DATQIYHSAL ERGISIAPGN LFSNQAEFRH FMRINASYDC SSEIVRAVKA LAQLLYHSPN
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