| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0948 |
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| Symbol | |
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| ID | 4256250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 1086725 |
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| End bp | 1087900 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638121559 |
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| Product | aromatic amino acid permease |
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| Protein accession | YP_737004 |
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| Protein GI | 114046454 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0814] Amino acid permeases |
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| TIGRFAM ID | [TIGR00837] aromatic amino acid transport protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0522769 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGGCT CGATAGCCAT TGTCGCGGGG ACCGCCATTG GCGCGGGAAT GTTAGCCTTA
CCCTTAGCCA CGGCCGCCTT AGGCATGGTG CCAGCCATTT TGTTAATGGT GGTGATTTGG
GGCTTGTCAG CCTATACCTC ATTGTTAATG CTTGAGATTA ACCTTCGCTC AGGCGTCGGT
GATAACGTTC ATGCCATCAC GGGCAAACTC CTCGGCAAGA AAGGCCAAAT GGTGCAAGGC
GCCTCCTTTC TCAGCTTACT CTTTGCCTTA ACGGCGGCGT ATTTGACAGG CGGTTCATCG
CTGTTAGTGC TTAAAGCCAA AAATATGTTC GACCTCGTAT TAGATAACCA ACTCGCGGTC
GTGCTGTTTA CCTTAGTGCT GGGTGGATTT GCGGCCTTAG GAGTCGCTTG GGTTGATAAA
GCCTCGCGCT TCTTGTTTTC GCTGATGATT TTATTACTGA TTGTGGTCGT GCTGTTTTTA
TTACCCGAAG TTAGTATCTC GAGTATGGCA ACCAGTGCAG TGGCCGAGTC CATGACCAGC
AGTTGGATGG CGGCGATTCC CGTAGTGTTT ACCTCCTTCG GTTTCCATGT GTGTATCGCC
ACCTTAGTAC GTTATTTGGA TGGCGATGCC GTTTCGCTGC GCAAGGTATT ATTAATCGGT
TCAACCATTC CACTCGCGTG TTATATCTTC TGGTTATTGG TGACCTTAGG CACAGTGGGT
GGCACCGAAA TCAGCAGCTT TAATGGCTCT TTACCTGCGC TGATCAGTGC ATTACAAGAG
ATTGCTCACA CGCCTTGGAT CAGCAAATGT ATTTCGCTGT TTGCGGATTT AGCCTTAATC
ACCTCTTTCC TCGGGGTAAC CTTAAGTCTG TATGATTTTG TGGCCGAACT GACCCGCGCG
AAGAAGACCT TCCTCGGCCG GGCCCAAACC TGGTTGTTAA CCTTTGTGCC GCCGCTGTTG
TGCGCGCTCT ATGTCCCTGA AGGTTTTGTG GCGGTATTAG GGTTTGCCGC CGTACCGCTG
GTGGTGATGA TTATCTTCCT GCCGATCGTG ATGGCACTAC GTCAGCGCCA AGCCACGCCG
CAGGGATACC AAGTATCTGG CGGCACATTT GCCCTCGGGA TTGCGGGACT GCTAGGCGCG
GTGATTATCG GCGCTCAGTT ATTTGTCGCG CTGTAA
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| Protein sequence | MLGSIAIVAG TAIGAGMLAL PLATAALGMV PAILLMVVIW GLSAYTSLLM LEINLRSGVG
DNVHAITGKL LGKKGQMVQG ASFLSLLFAL TAAYLTGGSS LLVLKAKNMF DLVLDNQLAV
VLFTLVLGGF AALGVAWVDK ASRFLFSLMI LLLIVVVLFL LPEVSISSMA TSAVAESMTS
SWMAAIPVVF TSFGFHVCIA TLVRYLDGDA VSLRKVLLIG STIPLACYIF WLLVTLGTVG
GTEISSFNGS LPALISALQE IAHTPWISKC ISLFADLALI TSFLGVTLSL YDFVAELTRA
KKTFLGRAQT WLLTFVPPLL CALYVPEGFV AVLGFAAVPL VVMIIFLPIV MALRQRQATP
QGYQVSGGTF ALGIAGLLGA VIIGAQLFVA L
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