Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0946 |
Symbol | |
ID | 4256248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1083508 |
End bp | 1084104 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638121557 |
Product | hypothetical protein |
Protein accession | YP_737002 |
Protein GI | 114046452 |
COG category | [S] Function unknown |
COG ID | [COG2119] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.452942 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0960568 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTGCTTAT GTCAAAAACC ACCCCTAAAA GGATCACACT TGGAAGCGTT ACTCGCCTCA ACCTTTACGG TTGCCATCGC CGAGATTGGC GATAAAACCC AACTGCTTGC CCTATTACTC GCAGCAAGAT TTAAAAATAA AACCGCGATT ATCTTGGGTA TTTTACTCTC GACTCTGTTT AACCATTTTG CCGCCGCTTG GCTTGGCCAA TGGGCGATTA ACTGGGTGAG CCCAGATGTA GCACGCTACT TGGTTGCCGC CTCCTTCTTT GCGATTGCAC TCTGGGTACT GATCCCCGAT AAAGTGGACG CCGAAGAGAG CCGTTTCTAT AAGATGGGAC CCTTTGTTGC GACCTTTATT CTATTCTTTA TCGCCGAAAT GGGCGACAAA ACCCAAATCG CGACTGTCGT GTTAGCCGCT AAATACGATG CCTTAGCCAT GGTGGTTGCA GGTACTACTT TGGGTATGTT GCTGGCGAAC GTCCCTGTGG TTATTGCAGG ACATTTTAGT GCCGAAAGAT TACCAATGAA GTGGATCCAC AGGGGCTGCG CAATTTTGTT TGCCCTGCTC GGCGTGGCAA CCTTAATGGT TAACTGA
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Protein sequence | MCLCQKPPLK GSHLEALLAS TFTVAIAEIG DKTQLLALLL AARFKNKTAI ILGILLSTLF NHFAAAWLGQ WAINWVSPDV ARYLVAASFF AIALWVLIPD KVDAEESRFY KMGPFVATFI LFFIAEMGDK TQIATVVLAA KYDALAMVVA GTTLGMLLAN VPVVIAGHFS AERLPMKWIH RGCAILFALL GVATLMVN
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