Gene Shewmr7_0935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0935 
Symbol 
ID4256237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1072194 
End bp1072799 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content45% 
IMG OID638121546 
Producthypothetical protein 
Protein accessionYP_736991 
Protein GI114046441 
COG category[R] General function prediction only 
COG ID[COG3417] Collagen-binding surface adhesin SpaP (antigen I/II family) 
TIGRFAM ID[TIGR02722] uncharacterized proteobacterial lipoprotein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000406943 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0868767 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGA CTATGAAACA ATTTAAACTG ATTTTTGTGC TGGCTGCCGT AATGGGTCTG 
GCTGCATGTC AATCGAAAGT CGAGTATGGC GATGCCACAG AAGTGGAAAC CGTTAACGAA
AACTTTGGCT CAACGGATCT GCAAGCCATC GCCGCTAAGA TGGTCGATAG CATGATGACT
TTCCCGCCAA TCGTTGCTAT GACAGCGAAC AACCGCCCAA TTTTGTTTGT CGATAGCATC
AAAAACAAAA CCTCTGAGCA TATCGATACA GAGTCAGTAA CCGACTCTAT CAGCAACAAG
TTACTGCGCT CAGGCAAGTT CCGTTTTATC GACATGACAA AAGTAGATTC AGTTCGTAAG
CAACTGGATT ACCAAAACAA TACCGGTATG GTTGACCCAT CAACCGCCAT CAAGTTTGGC
CGTCAAATTG GCGCCCAGTA CATGCTGTAT GGCAACCTGT CTAGCATCGT TAAGCAAGAT
GGCAGCACCA AAGACGTTTA CTACAAGATG ACTATGCGTC TGATGGACTT AGAAACAGGC
CTGATAGAAT GGTCTGACGA AAAAGAAATC CGTAAGACTA AGTCTAAGTC TTTCTTAGGC
ATGTAA
 
Protein sequence
MELTMKQFKL IFVLAAVMGL AACQSKVEYG DATEVETVNE NFGSTDLQAI AAKMVDSMMT 
FPPIVAMTAN NRPILFVDSI KNKTSEHIDT ESVTDSISNK LLRSGKFRFI DMTKVDSVRK
QLDYQNNTGM VDPSTAIKFG RQIGAQYMLY GNLSSIVKQD GSTKDVYYKM TMRLMDLETG
LIEWSDEKEI RKTKSKSFLG M