Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0935 |
Symbol | |
ID | 4256237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1072194 |
End bp | 1072799 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638121546 |
Product | hypothetical protein |
Protein accession | YP_736991 |
Protein GI | 114046441 |
COG category | [R] General function prediction only |
COG ID | [COG3417] Collagen-binding surface adhesin SpaP (antigen I/II family) |
TIGRFAM ID | [TIGR02722] uncharacterized proteobacterial lipoprotein |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000406943 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0868767 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTGA CTATGAAACA ATTTAAACTG ATTTTTGTGC TGGCTGCCGT AATGGGTCTG GCTGCATGTC AATCGAAAGT CGAGTATGGC GATGCCACAG AAGTGGAAAC CGTTAACGAA AACTTTGGCT CAACGGATCT GCAAGCCATC GCCGCTAAGA TGGTCGATAG CATGATGACT TTCCCGCCAA TCGTTGCTAT GACAGCGAAC AACCGCCCAA TTTTGTTTGT CGATAGCATC AAAAACAAAA CCTCTGAGCA TATCGATACA GAGTCAGTAA CCGACTCTAT CAGCAACAAG TTACTGCGCT CAGGCAAGTT CCGTTTTATC GACATGACAA AAGTAGATTC AGTTCGTAAG CAACTGGATT ACCAAAACAA TACCGGTATG GTTGACCCAT CAACCGCCAT CAAGTTTGGC CGTCAAATTG GCGCCCAGTA CATGCTGTAT GGCAACCTGT CTAGCATCGT TAAGCAAGAT GGCAGCACCA AAGACGTTTA CTACAAGATG ACTATGCGTC TGATGGACTT AGAAACAGGC CTGATAGAAT GGTCTGACGA AAAAGAAATC CGTAAGACTA AGTCTAAGTC TTTCTTAGGC ATGTAA
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Protein sequence | MELTMKQFKL IFVLAAVMGL AACQSKVEYG DATEVETVNE NFGSTDLQAI AAKMVDSMMT FPPIVAMTAN NRPILFVDSI KNKTSEHIDT ESVTDSISNK LLRSGKFRFI DMTKVDSVRK QLDYQNNTGM VDPSTAIKFG RQIGAQYMLY GNLSSIVKQD GSTKDVYYKM TMRLMDLETG LIEWSDEKEI RKTKSKSFLG M
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