Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0923 |
Symbol | |
ID | 4255345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1054867 |
End bp | 1055601 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638121534 |
Product | LrgB family protein |
Protein accession | YP_736979 |
Protein GI | 114046429 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1346] Putative effector of murein hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.47828 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAGCC TTAACTTAAG CCCAGCGGCG ATTTCCGAGT TACTGTTTTC GCAGACGGGA TTGGCGCTTA TCAGCTTGTT ATTAACGCTA TTCTGTTACT TTGCGGCCAA GCGTTTATAC AGGTTCCACC GTGTGTGGTG GTTGGCGCCG ATTGTACTTG CGCCCGTGGT GATCACGCTC TTGGTGTTTA ATCTCGATAT TCCACTGCCG ACTTATTTTG AATACACCCA TTGGTTAATG GCGATGTTAG CACCAGCGAC GATCGCATTT GCCTTGCCGA TTTATCGGGA GCGTAAACTC ATTCGCCAAT ATCCGCTGAC CATTGCCCTT GGGGTGATAG CGGGATTGTT GCTGGGCATG ATTTCTAGCT GGCTGTTAGT GAAATTTGTG CCGCTACCGG TCGAGCTGTC TAAGAGCTTG TTGGTGCGTT CGGTATCTAC GCCCTTTGCG ATGGAGGCGA CAAGCGCCTT TGGCGGTGTG CCAGAACTAA CGGCCATGAT GGTGCTCATC ACCGGCATTA TCGGCATGTT GGTATGTGAG CCGCTGTTCA AGCTGATGCA CATTCGTACA TCTTTAGGTA AGGGCGTGGC ATTAGGCGCT TCGGCCCACG GTGCGGGTGC CGCAAAAGCC AGTGAGTTAG GCCAGCAAGA GGGTGTTATT GCCAGTTTGA CCATGATTTT TATCGGAATC GCCATGGTGC TGGGCGCGCC CGTATTTGCG GTGATCTTCA GTTAA
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Protein sequence | MSSLNLSPAA ISELLFSQTG LALISLLLTL FCYFAAKRLY RFHRVWWLAP IVLAPVVITL LVFNLDIPLP TYFEYTHWLM AMLAPATIAF ALPIYRERKL IRQYPLTIAL GVIAGLLLGM ISSWLLVKFV PLPVELSKSL LVRSVSTPFA MEATSAFGGV PELTAMMVLI TGIIGMLVCE PLFKLMHIRT SLGKGVALGA SAHGAGAAKA SELGQQEGVI ASLTMIFIGI AMVLGAPVFA VIFS
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