Gene Shewmr7_0909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0909 
Symbol 
ID4257432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1042104 
End bp1042856 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content48% 
IMG OID638121520 
ProductDSBA oxidoreductase 
Protein accessionYP_736965 
Protein GI114046415 
COG category 
COG ID 
TIGRFAM ID[TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.322107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAC CAATCGCCTT GGCTGTCGCC TTAATCGTTG CACCATTTAG CACCTTTGCC 
GCCAATTATG TTGAAGGCAC GCACTACACG CAAATCTCTG ATAAAGCACC GAGCAGTGAG
CCAAAACTGA CCGAGTTTTT TTCTTTCTAC TGCCATAACT GCTTCAATAT GGAAACCAAC
TATCTGCCCG AAATCAAAGC GAATCTAAGC AAAGACATCG CATTTGACAC TAAGCATGTT
GATTTTATGA ACAGCGACAT TGGCACCGAA GTGATGCGCT CACTGGCGGT GATCCATGAG
TTAGATAATA AAGACGCTAT CGCCCATGCC ATGTTTGCCG CCATCCAAGG CGAATCAGGC
GCAAATGGCC ACGACCACAG TGCGCCGGGC CATAAGCATG AACCGCAAAT CAACAGCCGT
GACGACATTA AGCAAGTCTT TGCCAAGTTT GGTATCGATG CAGCCCAGTA CGACAAACTT
GCCGACAGCA AGACCACTGA TGAGAAACTG GCCCTATGGC GTGCCCAGCA GAATCAATTT
CGCGTTGAAA GCGTGCCAGC CTTTATCGTT AACGATAAAT ATGCGGTTAA CTTAAGCAGT
ATCAGAACCT TAGATGAGCT GATTGGTTTA ATTAACTATC TGGCCGTTGA GAAAGATGCT
CAGGCGCCTA AGAGTTCAGG CGGCAGCTTA AACTGGTTAT TCTTAGCCTT TGCCGCCGTT
ATCGCCCTTG GCCGCCAAAA GCGTTTGAGC TAA
 
Protein sequence
MIKPIALAVA LIVAPFSTFA ANYVEGTHYT QISDKAPSSE PKLTEFFSFY CHNCFNMETN 
YLPEIKANLS KDIAFDTKHV DFMNSDIGTE VMRSLAVIHE LDNKDAIAHA MFAAIQGESG
ANGHDHSAPG HKHEPQINSR DDIKQVFAKF GIDAAQYDKL ADSKTTDEKL ALWRAQQNQF
RVESVPAFIV NDKYAVNLSS IRTLDELIGL INYLAVEKDA QAPKSSGGSL NWLFLAFAAV
IALGRQKRLS