Gene Shewmr7_0898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0898 
Symbol 
ID4256550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1029910 
End bp1030794 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content47% 
IMG OID638121509 
Productphospholipase A(1) 
Protein accessionYP_736954 
Protein GI114046404 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2829] Outer membrane phospholipase A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.110394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTAT TTTATAAAGG TATCGCATTA ATTGGGCTGT TGACTTGTAC CGGGCTACAG 
GCGGAAGAAT CCCTAGTTGA AGGGCGCGTA CAGGACGAAC TTGCCACCTC AGAACGTCCC
TTTGTGATCA CGCCGCATAA AGTGAATTAC ATTTTACCCG CCACCTATAA CCCCGATCCC
AATATGGCCC CCTTCGCCCA AGATGCGGCA GAGAACAACT ACACACTGGA CGAGATGGAA
GCTAAGTTCC AGATAAGCTT TAAGTTTCCT ATTTGGTACA ACGTCTTTGG CGATAATGGC
CACCTGTTTT TTGCCTACAC TAACCAATCC TATTGGCAGT TGTATAACAA GGAGATCTCC
TCCCCCTTCC GTGAGACTAA CCACGAACCC GAAATCTTTA TGCTGTTTAA CAATGATTGG
AAAATCGGTA GCGTGACCAA CTCCTTCTGG GGATTTGGTG CTGTGCATCA ATCGAATGGT
AAATCTGGGC TATTATCCCG AAGCTGGAAC CGCATCTATG GCACCATGAT CTTCGATGCT
GGCCCACTGG CGTTTTCAAC TAAGGTATGG TGGCGGATTC CGGAGGATGA AAAAACCGAT
ATCCATCAAC CCCGTGGTGA CGACAACCCC GATATTGATG AATACATAGG CAAAGCCGAG
TTTGTGGGTG TGTATGGGAT TGATGATCAT AGGTTCACCC TCACCCTAAA AACCAACTTT
AAAGACATTG ACCGTGGCTC GGCGGAGCTG ACTTGGAGTT ACCCCATTGT CGGTAATTTA
CGCCTTTATA CTCAATACTT TAACGGATAT GGCGAGAGTC TTATTGACTA CAATTACCAT
AACCAACGCA TCGGTATCGG CGTATCACTC AACGATATTC TCTAA
 
Protein sequence
MSLFYKGIAL IGLLTCTGLQ AEESLVEGRV QDELATSERP FVITPHKVNY ILPATYNPDP 
NMAPFAQDAA ENNYTLDEME AKFQISFKFP IWYNVFGDNG HLFFAYTNQS YWQLYNKEIS
SPFRETNHEP EIFMLFNNDW KIGSVTNSFW GFGAVHQSNG KSGLLSRSWN RIYGTMIFDA
GPLAFSTKVW WRIPEDEKTD IHQPRGDDNP DIDEYIGKAE FVGVYGIDDH RFTLTLKTNF
KDIDRGSAEL TWSYPIVGNL RLYTQYFNGY GESLIDYNYH NQRIGIGVSL NDIL