Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0892 |
Symbol | |
ID | 4256544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1020179 |
End bp | 1021993 |
Gene Length | 1815 bp |
Protein Length | 604 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638121503 |
Product | sulfite reductase (NADPH) alpha subunit |
Protein accession | YP_736948 |
Protein GI | 114046398 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0369] Sulfite reductase, alpha subunit (flavoprotein) |
TIGRFAM ID | [TIGR01931] sulfite reductase [NADPH] flavoprotein, alpha-component |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGTTAA AAGAACTTTC ATCACTGGCT TCACCCCTGT CGCAACCGCA GGTCGAAAAG CTGAAACAAC TCACCGCTGA ATTAAATGCC GTGCAACTTG CTTGGGTGAG CGGTTATTTA GCCGCAACGG CCAATGCACC TGGCAATCTG GCACAGCTTG CGCCCGTGTC CGATGCTCAG GCGGCGCAGA CAGTGACCAT TCTCTATGGC AGCCAAACCG GTAATGGCCG TGGCATTGCC AAAGCCTTGG CCGAGAAGGC AAAAGCGCAG GGCTATAGCG TGAATTTAGC CTCTATGGGT GAATACAATG TGCGTCAGCT TAAGCAAGAA ACCTTGTTAT TGCTGGTGGT CAGTACCCAT GGTGAAGGTG AAGCGCCGGA TGATGCGATT GAATTACATA AGTTTTTAGC ATCGAAACGT GCCCCTCAAT TAAGCAACTT ACATTACTCT GTGTTGGCGC TGGGCGATTC AAGCTATGAG TTTTTCTGCC AGACAGGTAA AGACTTCGAT GCCCGTCTTT CGGCATTAGG CGCCAAAGCG CTGCTGCCTC TGGTTGAGTG TGATGTGGAC TATGAGGCTG CGGCCGGACA GTGGCACGCC GATGTACTCA CCGCTGTGAA GCCACTGATT CAAACCACGG CTAACGTGGT GGCGCTCAAT GATACCAGCT CGGCACTCGC TGCCAGCGAG AGCGAATTTA CTAAGCAAAA CCCTTACAGT GCCGAAGTGT TGGTGAGCCA GAAGATCACC GGACGTGGTT CAGACCGAGA CGTGCGACAC GTTGAAATCG ATTTAGGCGA GTCAGGGCTG TGTTACGAAG TCGGTGATGC CCTTGGGGTG TGGTTTAGCA ACAATGAAAC TTTGGTCGAT GAGATTTTAG CGGGCTTAGG GTTAGCCGCC GATACTAAGG TGACTGTTGG TAATGAGTCC ATCAGTCTCA AACAAGCCTT GCTCGAGAAG AAAGAGCTGA CACAGTTATA TCCTGGTTTA GTCAAAGCGT GGGCCGAGTT ATCTGCAAGC CCAGAGCTGC TTGCCCTGAG CGGAGATAAA GAACAGGTTC GCCAGTTTAT CTTACACCAT CAATTTGCAG ACTTAGTGGC GAATTATCAG CTCAAGGCCG ATGCTAATCT CGATGCAAAC AAGTTAGTGG AATTATTACG CCCATTAACG CCAAGACTCT ACTCCATCGC CTCGAGCCAG AGTGAAGTCG ATACCGAAGT GCATCTCACC GTGGCTTTAG TGGAAGATGA GCACCAAGGA CAAGCCCGTT TTGGTGGCGC ATCGCATTTC TTAGCCTCGG CAGAGGAAGG CGCCGAAGTA AAAGTGTATG TTGAACCGAA TAAGCATTTC CGTTTACCTG AAGATCCACA AACGCCAGTC ATCATGATTG GCCCTGGCAC AGGGGTTGCG CCGTTTCGCG CCTTTATGCA GGAACGCGTG GCGCAAGGCG CTGAGGGCGA TAGCTGGTTA TTCTTTGGTA ATCCTCACTT TGAGCAGGAC TTCCTGTATC AAACCGAGTG GCAACAGTAT CTGAAAAACG GCGATTTAAC CCGTATCGAT GTGGCATTTT CGCGGGATCA GGCCCATAAG ATTTACGTGC AGCACCGCAT TAAAGAGCAG GGACAAACCC TGTGGCAATG GCTGCAAAAT GGTGCGCATC TCTATATTTG TGGTGATGCC GAACGTATGG CTAAAGACGT ACACCAAGCC CTATTAGCGA TTGCGGTGGA GTTTGGCGGA CTGTCGAGCG AGGCGGCGGA AGAATATTTC GAGACCCTGC GCAGTCATAA ACGTTACCAA AAAGACGTGT ACTAA
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Protein sequence | MLLKELSSLA SPLSQPQVEK LKQLTAELNA VQLAWVSGYL AATANAPGNL AQLAPVSDAQ AAQTVTILYG SQTGNGRGIA KALAEKAKAQ GYSVNLASMG EYNVRQLKQE TLLLLVVSTH GEGEAPDDAI ELHKFLASKR APQLSNLHYS VLALGDSSYE FFCQTGKDFD ARLSALGAKA LLPLVECDVD YEAAAGQWHA DVLTAVKPLI QTTANVVALN DTSSALAASE SEFTKQNPYS AEVLVSQKIT GRGSDRDVRH VEIDLGESGL CYEVGDALGV WFSNNETLVD EILAGLGLAA DTKVTVGNES ISLKQALLEK KELTQLYPGL VKAWAELSAS PELLALSGDK EQVRQFILHH QFADLVANYQ LKADANLDAN KLVELLRPLT PRLYSIASSQ SEVDTEVHLT VALVEDEHQG QARFGGASHF LASAEEGAEV KVYVEPNKHF RLPEDPQTPV IMIGPGTGVA PFRAFMQERV AQGAEGDSWL FFGNPHFEQD FLYQTEWQQY LKNGDLTRID VAFSRDQAHK IYVQHRIKEQ GQTLWQWLQN GAHLYICGDA ERMAKDVHQA LLAIAVEFGG LSSEAAEEYF ETLRSHKRYQ KDVY
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