Gene Shewmr7_0892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0892 
Symbol 
ID4256544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1020179 
End bp1021993 
Gene Length1815 bp 
Protein Length604 aa 
Translation table11 
GC content51% 
IMG OID638121503 
Productsulfite reductase (NADPH) alpha subunit 
Protein accessionYP_736948 
Protein GI114046398 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0369] Sulfite reductase, alpha subunit (flavoprotein) 
TIGRFAM ID[TIGR01931] sulfite reductase [NADPH] flavoprotein, alpha-component 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTTAA AAGAACTTTC ATCACTGGCT TCACCCCTGT CGCAACCGCA GGTCGAAAAG 
CTGAAACAAC TCACCGCTGA ATTAAATGCC GTGCAACTTG CTTGGGTGAG CGGTTATTTA
GCCGCAACGG CCAATGCACC TGGCAATCTG GCACAGCTTG CGCCCGTGTC CGATGCTCAG
GCGGCGCAGA CAGTGACCAT TCTCTATGGC AGCCAAACCG GTAATGGCCG TGGCATTGCC
AAAGCCTTGG CCGAGAAGGC AAAAGCGCAG GGCTATAGCG TGAATTTAGC CTCTATGGGT
GAATACAATG TGCGTCAGCT TAAGCAAGAA ACCTTGTTAT TGCTGGTGGT CAGTACCCAT
GGTGAAGGTG AAGCGCCGGA TGATGCGATT GAATTACATA AGTTTTTAGC ATCGAAACGT
GCCCCTCAAT TAAGCAACTT ACATTACTCT GTGTTGGCGC TGGGCGATTC AAGCTATGAG
TTTTTCTGCC AGACAGGTAA AGACTTCGAT GCCCGTCTTT CGGCATTAGG CGCCAAAGCG
CTGCTGCCTC TGGTTGAGTG TGATGTGGAC TATGAGGCTG CGGCCGGACA GTGGCACGCC
GATGTACTCA CCGCTGTGAA GCCACTGATT CAAACCACGG CTAACGTGGT GGCGCTCAAT
GATACCAGCT CGGCACTCGC TGCCAGCGAG AGCGAATTTA CTAAGCAAAA CCCTTACAGT
GCCGAAGTGT TGGTGAGCCA GAAGATCACC GGACGTGGTT CAGACCGAGA CGTGCGACAC
GTTGAAATCG ATTTAGGCGA GTCAGGGCTG TGTTACGAAG TCGGTGATGC CCTTGGGGTG
TGGTTTAGCA ACAATGAAAC TTTGGTCGAT GAGATTTTAG CGGGCTTAGG GTTAGCCGCC
GATACTAAGG TGACTGTTGG TAATGAGTCC ATCAGTCTCA AACAAGCCTT GCTCGAGAAG
AAAGAGCTGA CACAGTTATA TCCTGGTTTA GTCAAAGCGT GGGCCGAGTT ATCTGCAAGC
CCAGAGCTGC TTGCCCTGAG CGGAGATAAA GAACAGGTTC GCCAGTTTAT CTTACACCAT
CAATTTGCAG ACTTAGTGGC GAATTATCAG CTCAAGGCCG ATGCTAATCT CGATGCAAAC
AAGTTAGTGG AATTATTACG CCCATTAACG CCAAGACTCT ACTCCATCGC CTCGAGCCAG
AGTGAAGTCG ATACCGAAGT GCATCTCACC GTGGCTTTAG TGGAAGATGA GCACCAAGGA
CAAGCCCGTT TTGGTGGCGC ATCGCATTTC TTAGCCTCGG CAGAGGAAGG CGCCGAAGTA
AAAGTGTATG TTGAACCGAA TAAGCATTTC CGTTTACCTG AAGATCCACA AACGCCAGTC
ATCATGATTG GCCCTGGCAC AGGGGTTGCG CCGTTTCGCG CCTTTATGCA GGAACGCGTG
GCGCAAGGCG CTGAGGGCGA TAGCTGGTTA TTCTTTGGTA ATCCTCACTT TGAGCAGGAC
TTCCTGTATC AAACCGAGTG GCAACAGTAT CTGAAAAACG GCGATTTAAC CCGTATCGAT
GTGGCATTTT CGCGGGATCA GGCCCATAAG ATTTACGTGC AGCACCGCAT TAAAGAGCAG
GGACAAACCC TGTGGCAATG GCTGCAAAAT GGTGCGCATC TCTATATTTG TGGTGATGCC
GAACGTATGG CTAAAGACGT ACACCAAGCC CTATTAGCGA TTGCGGTGGA GTTTGGCGGA
CTGTCGAGCG AGGCGGCGGA AGAATATTTC GAGACCCTGC GCAGTCATAA ACGTTACCAA
AAAGACGTGT ACTAA
 
Protein sequence
MLLKELSSLA SPLSQPQVEK LKQLTAELNA VQLAWVSGYL AATANAPGNL AQLAPVSDAQ 
AAQTVTILYG SQTGNGRGIA KALAEKAKAQ GYSVNLASMG EYNVRQLKQE TLLLLVVSTH
GEGEAPDDAI ELHKFLASKR APQLSNLHYS VLALGDSSYE FFCQTGKDFD ARLSALGAKA
LLPLVECDVD YEAAAGQWHA DVLTAVKPLI QTTANVVALN DTSSALAASE SEFTKQNPYS
AEVLVSQKIT GRGSDRDVRH VEIDLGESGL CYEVGDALGV WFSNNETLVD EILAGLGLAA
DTKVTVGNES ISLKQALLEK KELTQLYPGL VKAWAELSAS PELLALSGDK EQVRQFILHH
QFADLVANYQ LKADANLDAN KLVELLRPLT PRLYSIASSQ SEVDTEVHLT VALVEDEHQG
QARFGGASHF LASAEEGAEV KVYVEPNKHF RLPEDPQTPV IMIGPGTGVA PFRAFMQERV
AQGAEGDSWL FFGNPHFEQD FLYQTEWQQY LKNGDLTRID VAFSRDQAHK IYVQHRIKEQ
GQTLWQWLQN GAHLYICGDA ERMAKDVHQA LLAIAVEFGG LSSEAAEEYF ETLRSHKRYQ
KDVY