Gene Shewmr7_0890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0890 
SymbolpntB 
ID4256542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1016739 
End bp1018223 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content52% 
IMG OID638121501 
Productpyridine nucleotide transhydrogenase 
Protein accessionYP_736946 
Protein GI114046396 
COG category[C] Energy production and conversion 
COG ID[COG1282] NAD/NADP transhydrogenase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0967297 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTCAAG GACTGGTAAC AGCAGCTTAC ATTATTGCCG CCGTGCTCTT TATCTTCAGT 
CTCGCAGGAT TGTCGAAGCA AGAAACAGCC AAACACGGCA ATTTATTTGG TATCACAGGT
ATGGCCATAG CCCTACTGGC GACCATTTTT AATCCTGACA CCAGCGGTGT CGCTTGGATT
ATTGTCGCCA TGGTGATTGG TGGTGCCATC GGCGTGCGTT TAGCACTTAA AGTCGAAATG
ACGGAAATGC CCGAACTGGT CGCAGTACTC CACAGCTTTG TGGGTATGGC AGCGGTATTA
GTGGGCTTTA ACAGCTTTAT CGACCTACAC CCAGAGCAAG TATCGCAAGT GGTTGTGGCC
GTTGGCGGAG ATATAAACTC CACCTTAGCC GCAGTGCAGG ATGCGCTAAG CGAAGCGGCC
AAAGCCGCCG AGAAAGCCCA TTTAACTGGC GCTATGCTCA ACATTCACTT AGTGGAAGTG
TTCCTCGGGA TCTTTATCGG TGCGGTGACC TTCACGGGTT CTATCGTGGC CTTCGGTAAG
TTACGCGGAT TAATTTCCTC AAAACCTTTG ATGTTGCCAC ATCGCCATAA ACTGAACCTC
GCAGCGGTAT TGGTATCATT GGCGCTATTG GTTTACTTCG TACAAACGGG TGGCACTATG
CCAGCCCTAC TGTTGATGAC ACTTATCGCC TTCGCCTTTG GCTGGCATTT AGTGGCTTCA
ATCGGCGGTG CGGACATGCC AGTTGTGGTC TCTATGCTGA ACTCCTACTC GGGTTGGGCA
GCGGCGGCAG CGGGCTTTAT GCTGTCAAAC GATCTGCTGA TCGTGACAGG TGCGCTCGTG
GGCTCATCGG GTGCGATTCT GTCTTACATC ATGTGTAAGG CGATGAACCG CTCGTTTATC
TCAGTTATCG CAGGTGGATT TGGCACCGAT GGTGTGGCCT CATCTGGCGA TGAAGAAATG
GGCGAATACC GTGAAACCAA CGCCGAAGAT GTGGCGGATA TGCTGAAAAA CGCAACTTCT
GTCATCATCA CCCCAGGCTA TGGTATGGCA GTGGCGCAGG CGCAATATCC TGTGGCTGAA
ATCACTCAAA AACTGCGTGA TCGCGGCGTG AAGGTGCGCT TTGGTATTCA CCCAGTGGCG
GGTCGCTTAC CAGGCCATAT GAACGTACTC TTGGCCGAAG CCAAAGTGCC CTACGATATC
GTGCTCGAAA TGGACGAAAT CAACGAGGAC TTTAGCGATA CCGACGTAGT GCTCGTCATT
GGTGCCAACG ATACGGTGAA CCCTGCGGCG ATGGAAGATC CGGGCAGCCC AATTGCGGGC
ATGCCAGTGC TCGAAGTGTG GAAAGCGCAA AACGTGATTG GCTTTAAACG TTCGATGAAC
ACAGGTTATG CGGGTGTACA AAACCCACTG TTCTTTAAAG ACAATACTCA AATGCTGTTC
GGCGATGCTA AAGCCAGCGT TGAGGCGATT TTAAAAGCGC TGTAA
 
Protein sequence
MSQGLVTAAY IIAAVLFIFS LAGLSKQETA KHGNLFGITG MAIALLATIF NPDTSGVAWI 
IVAMVIGGAI GVRLALKVEM TEMPELVAVL HSFVGMAAVL VGFNSFIDLH PEQVSQVVVA
VGGDINSTLA AVQDALSEAA KAAEKAHLTG AMLNIHLVEV FLGIFIGAVT FTGSIVAFGK
LRGLISSKPL MLPHRHKLNL AAVLVSLALL VYFVQTGGTM PALLLMTLIA FAFGWHLVAS
IGGADMPVVV SMLNSYSGWA AAAAGFMLSN DLLIVTGALV GSSGAILSYI MCKAMNRSFI
SVIAGGFGTD GVASSGDEEM GEYRETNAED VADMLKNATS VIITPGYGMA VAQAQYPVAE
ITQKLRDRGV KVRFGIHPVA GRLPGHMNVL LAEAKVPYDI VLEMDEINED FSDTDVVLVI
GANDTVNPAA MEDPGSPIAG MPVLEVWKAQ NVIGFKRSMN TGYAGVQNPL FFKDNTQMLF
GDAKASVEAI LKAL