Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0890 |
Symbol | pntB |
ID | 4256542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1016739 |
End bp | 1018223 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638121501 |
Product | pyridine nucleotide transhydrogenase |
Protein accession | YP_736946 |
Protein GI | 114046396 |
COG category | [C] Energy production and conversion |
COG ID | [COG1282] NAD/NADP transhydrogenase beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0967297 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCTCAAG GACTGGTAAC AGCAGCTTAC ATTATTGCCG CCGTGCTCTT TATCTTCAGT CTCGCAGGAT TGTCGAAGCA AGAAACAGCC AAACACGGCA ATTTATTTGG TATCACAGGT ATGGCCATAG CCCTACTGGC GACCATTTTT AATCCTGACA CCAGCGGTGT CGCTTGGATT ATTGTCGCCA TGGTGATTGG TGGTGCCATC GGCGTGCGTT TAGCACTTAA AGTCGAAATG ACGGAAATGC CCGAACTGGT CGCAGTACTC CACAGCTTTG TGGGTATGGC AGCGGTATTA GTGGGCTTTA ACAGCTTTAT CGACCTACAC CCAGAGCAAG TATCGCAAGT GGTTGTGGCC GTTGGCGGAG ATATAAACTC CACCTTAGCC GCAGTGCAGG ATGCGCTAAG CGAAGCGGCC AAAGCCGCCG AGAAAGCCCA TTTAACTGGC GCTATGCTCA ACATTCACTT AGTGGAAGTG TTCCTCGGGA TCTTTATCGG TGCGGTGACC TTCACGGGTT CTATCGTGGC CTTCGGTAAG TTACGCGGAT TAATTTCCTC AAAACCTTTG ATGTTGCCAC ATCGCCATAA ACTGAACCTC GCAGCGGTAT TGGTATCATT GGCGCTATTG GTTTACTTCG TACAAACGGG TGGCACTATG CCAGCCCTAC TGTTGATGAC ACTTATCGCC TTCGCCTTTG GCTGGCATTT AGTGGCTTCA ATCGGCGGTG CGGACATGCC AGTTGTGGTC TCTATGCTGA ACTCCTACTC GGGTTGGGCA GCGGCGGCAG CGGGCTTTAT GCTGTCAAAC GATCTGCTGA TCGTGACAGG TGCGCTCGTG GGCTCATCGG GTGCGATTCT GTCTTACATC ATGTGTAAGG CGATGAACCG CTCGTTTATC TCAGTTATCG CAGGTGGATT TGGCACCGAT GGTGTGGCCT CATCTGGCGA TGAAGAAATG GGCGAATACC GTGAAACCAA CGCCGAAGAT GTGGCGGATA TGCTGAAAAA CGCAACTTCT GTCATCATCA CCCCAGGCTA TGGTATGGCA GTGGCGCAGG CGCAATATCC TGTGGCTGAA ATCACTCAAA AACTGCGTGA TCGCGGCGTG AAGGTGCGCT TTGGTATTCA CCCAGTGGCG GGTCGCTTAC CAGGCCATAT GAACGTACTC TTGGCCGAAG CCAAAGTGCC CTACGATATC GTGCTCGAAA TGGACGAAAT CAACGAGGAC TTTAGCGATA CCGACGTAGT GCTCGTCATT GGTGCCAACG ATACGGTGAA CCCTGCGGCG ATGGAAGATC CGGGCAGCCC AATTGCGGGC ATGCCAGTGC TCGAAGTGTG GAAAGCGCAA AACGTGATTG GCTTTAAACG TTCGATGAAC ACAGGTTATG CGGGTGTACA AAACCCACTG TTCTTTAAAG ACAATACTCA AATGCTGTTC GGCGATGCTA AAGCCAGCGT TGAGGCGATT TTAAAAGCGC TGTAA
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Protein sequence | MSQGLVTAAY IIAAVLFIFS LAGLSKQETA KHGNLFGITG MAIALLATIF NPDTSGVAWI IVAMVIGGAI GVRLALKVEM TEMPELVAVL HSFVGMAAVL VGFNSFIDLH PEQVSQVVVA VGGDINSTLA AVQDALSEAA KAAEKAHLTG AMLNIHLVEV FLGIFIGAVT FTGSIVAFGK LRGLISSKPL MLPHRHKLNL AAVLVSLALL VYFVQTGGTM PALLLMTLIA FAFGWHLVAS IGGADMPVVV SMLNSYSGWA AAAAGFMLSN DLLIVTGALV GSSGAILSYI MCKAMNRSFI SVIAGGFGTD GVASSGDEEM GEYRETNAED VADMLKNATS VIITPGYGMA VAQAQYPVAE ITQKLRDRGV KVRFGIHPVA GRLPGHMNVL LAEAKVPYDI VLEMDEINED FSDTDVVLVI GANDTVNPAA MEDPGSPIAG MPVLEVWKAQ NVIGFKRSMN TGYAGVQNPL FFKDNTQMLF GDAKASVEAI LKAL
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