Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0881 |
Symbol | |
ID | 4256515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1004556 |
End bp | 1005470 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638121492 |
Product | ErfK/YbiS/YcfS/YnhG family protein |
Protein accession | YP_736937 |
Protein GI | 114046387 |
COG category | [S] Function unknown |
COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000038242 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTATGC TTCGCACCAC AGCTTTATTA TTGACTCTGG TTTTTCCGAG TCTTTCCGCT TTAGCAACGG AATACCCTTT ACCGTCTTCG AAGAGTCGGT TAGTTGGCGA GAACCTGTAT TACACAGTGC CAGAGGGTAA ACACACCCTC GAAGATATTG CCGCTAAATT CCAACTCGGT CTAAGCAACT TGCTGGAAGC AAACCCTGGC GTGGATCCTT TCCTACCAAC ACCAGGCAGC AAGCTATTAA TTCCTCAACA ACTCATTCTG CCAAATGCGC CGCGTGAAGG CATAGTCATC AACGTCGCCG AAATGCGCCT GTATTACTAT CCAAAAGGTA AGAACACTGT TGAAGTGCTG CCAATCGGTA TTGGTCAGAT TGGTAAAGAT ACCCCTGAAA ACTGGGTCAC CAGTGTTCAA CGTAAACGCG CGAACCCAAC TTGGACACCG ACACCACGTA TTCGTAAAGA ATATGCGGCA AGGGGCGAAA TTCTGCCTGC GGTATGGCCA GCGGGTCCCG ATAACCCAAT GGGACTCTAC GCGCTCTACA TAGGTAACTT GTATGCCATC CATGGTACCA ACGCTAGCTT CGGTATTGGT TTACGTGTTA GCCAAGGCTG CGTACGTTTA CGCCACGATG ACATTGAACA CTTATTCAAA ACGGTTCCCG TGGGTACCCG AGTACAATTT GTGAACCAAC CGATTAAAGC GACCGAAGAG CCAGATGGTA AGCGCTACTT AGCCGTGCAC CAGCCACTGT CGCGCACTAT TGCCGAGTTT GAATCAGAAG AGCCAGTCTC TCTGACCTTA CCGAAAGACA TCGCCAAGTT TATTGCCAAG GCCGATACCG ATTCAGCAGT GATTAAAAAA CTGCTCGATG AGCGTACAGG CGTGCCAACG ATTATTAATC AGTAA
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Protein sequence | MSMLRTTALL LTLVFPSLSA LATEYPLPSS KSRLVGENLY YTVPEGKHTL EDIAAKFQLG LSNLLEANPG VDPFLPTPGS KLLIPQQLIL PNAPREGIVI NVAEMRLYYY PKGKNTVEVL PIGIGQIGKD TPENWVTSVQ RKRANPTWTP TPRIRKEYAA RGEILPAVWP AGPDNPMGLY ALYIGNLYAI HGTNASFGIG LRVSQGCVRL RHDDIEHLFK TVPVGTRVQF VNQPIKATEE PDGKRYLAVH QPLSRTIAEF ESEEPVSLTL PKDIAKFIAK ADTDSAVIKK LLDERTGVPT IINQ
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