Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0871 |
Symbol | |
ID | 4256505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 992563 |
End bp | 993351 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638121482 |
Product | hypothetical protein |
Protein accession | YP_736927 |
Protein GI | 114046377 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1664] Integral membrane protein CcmA involved in cell shape determination |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAGCA AAGGTAATAG TGTCACTTTT ATCAGTGCCT CAACCTCAAT TGAGGGTGAG ATTCAACTGG CGGGCACGGC ATTAGTTGCG GGTAAATTGC AGGGCAAGAT TGGCTCAGCG GGACAAATTA AGATTGAACT CGGTGGTGAA ATTTCCGGTG AAATCAACTG TGATGAGCTG CGGGTCTGCG GTTTATTTAG TGGCAGAGCC TGTTGTAATA AGTTGATTAT TACCAATTCT GGTGTGGTTG AAGGTGAAGT AGCCAGCCAT CAGATGGAGA TTTACGAAGG CGGCCAGTTT ATTGGTCAGC GGATTAAAGG CCCTGAGCTA GATACCTTGC CAGACATACT GCAAGCACTC GCGCCAGCAG AACATCGCTC GGATACGCAG TTATATGCCA GTGAGAGCGG TTCATTAAGA GGCGATAATC GCGCCATTCG CCCTTGGTTG TATGTTGCTG CGGCAACGGT CGTCATCGCC TTAGGTTTTA GTTTTGGACC CGAACAATTG CGTGAGTGGT TACCGAATGT GAGTGATAAC CCGCTTAGTG CTGAAGTGTC TCCCGTGGCT CAGGAGCAGG ATGTTCCATT ACTCACGCAA CAAACGACTG CGCCAGATAC CGCGAATGCC GACAATAGCG CAGCCATATC CGAAGAGTCC GAACCGCCGG CTCTGTCGCA GGATCCGGCG ATGGAAGATT TACAACAAAT GGAGCAAGCA CATGCTCAGA TGGCTCAGGG TGAGAGTGGT GCTGCGCCCA CCAGTGAGAA TGCTGGCAAT AAGCTCTGA
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Protein sequence | MASKGNSVTF ISASTSIEGE IQLAGTALVA GKLQGKIGSA GQIKIELGGE ISGEINCDEL RVCGLFSGRA CCNKLIITNS GVVEGEVASH QMEIYEGGQF IGQRIKGPEL DTLPDILQAL APAEHRSDTQ LYASESGSLR GDNRAIRPWL YVAAATVVIA LGFSFGPEQL REWLPNVSDN PLSAEVSPVA QEQDVPLLTQ QTTAPDTANA DNSAAISEES EPPALSQDPA MEDLQQMEQA HAQMAQGESG AAPTSENAGN KL
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