Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0868 |
Symbol | |
ID | 4256502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 989469 |
End bp | 990404 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638121479 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_736924 |
Protein GI | 114046374 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACAAA CCATACTCGG AGCCAACGGC CAAATCGGCA GAGAACTAGC CCTTAGCCTT AACCGCGAGT TTGACTGTGA CATTCGCCTT GTTAGCCGTA ATCCGCAAAA AGTGAATGAA ACGGATGAGT TAAAGAGCGC CAACCTGCTC GACTTAGCAC AAACCTTAGC CGCGGTGGAA GGCTCTGAAA TCGTTTATCT CACGGCGGGG CTGCCTATGG ATACTCAGCT TTGGGTCGAG CAATGGCCTG TTATCATGGG TAATGTTATC CAGGCCTGTA AGACTCACGG CGCCAAGCTG GTGTATTTCG ATAATACCTA TATGTATCCG CAAACGGCGG CGCCGCAGCG CGAGGATGTG GCATTTGCGC CCAATGGTGC CAAAGGACGC GTGAGGGGCG AAATCACCCA AATGTTACTC GATGAAATCC ATGCGGGGCG ACTCGAGGCG ATGATCTGCC GTGCCCCTGA ATTCTACGGC CCTGGCCAAA CCCAGAGCAT TACCAATACC ACGGTTATCG ACAATCTCGC CCAAGGGAAA AAGGCCAAAG TGTTTTTGCG TGACGATACG AAACGCAGTT TGATTTACAC CCCAGATGCC AGCCGCGCCA TGGCCTTACT CGGGAATACT CCCGATGCCT ATGGCCAAAC ATGGCACTTA CCCTGTGATG ACAATAGGCT GACCTATAAG GAATTTATTA CTCTTGCTGC CGACATTTTT AAAGTGCCGG CTCGATATAC TGTGGTCAAA GAATGGCAAC TGTGGCTCGC GGGTAAATTC AATCCCACCA TACGTGATGC GGGAGAGTTG CTGCCCCGTT ATCGCTGCGA CAATCTGTTT ATTTCCGATA AATTTAAAGC CCGTTTCCCT GATTTTAAGA TCACTCGCTT TGCACAAGGG CTGGCTGAAA TCGCCAAGGA GCGCCAGTTA ATCTAA
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Protein sequence | MRQTILGANG QIGRELALSL NREFDCDIRL VSRNPQKVNE TDELKSANLL DLAQTLAAVE GSEIVYLTAG LPMDTQLWVE QWPVIMGNVI QACKTHGAKL VYFDNTYMYP QTAAPQREDV AFAPNGAKGR VRGEITQMLL DEIHAGRLEA MICRAPEFYG PGQTQSITNT TVIDNLAQGK KAKVFLRDDT KRSLIYTPDA SRAMALLGNT PDAYGQTWHL PCDDNRLTYK EFITLAADIF KVPARYTVVK EWQLWLAGKF NPTIRDAGEL LPRYRCDNLF ISDKFKARFP DFKITRFAQG LAEIAKERQL I
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