| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0838 |
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| Symbol | |
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| ID | 4256631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 952232 |
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| End bp | 953881 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638121449 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_736894 |
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| Protein GI | 114046344 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTTT CCTCCCTAGG TTTATCTTTA CCCATCCAAA AAGCTGTTAC TGAACAAGGT
TATGACACAC CATCTCCCAT TCAAGCACAG GCCATCCCGG CCGTTCTGAC GGGTAAAGAC
GTAATGGCTG CGGCCCAAAC AGGAACAGGA AAAACCGCAG GTTTTACCCT GCCTTTGCTC
GAATTACTCT CTAAAGGCAA TAAAGCCAAG GCGGGACAAA TCCGCGCCCT AGTGCTAACC
CCCACGCGCG AGTTAGCGGC TCAAGTAAGC GAAAGTGTTG AAACTTATGG TAAATATCTT
CCATTGCGCT CAGCGGTCGT CTTTGGTGGC GTGCCAATTA ATCCCCAAAT TCAAAAGCTA
CGCCACGGGG TAGATGTACT GGTTGCCACA CCAGGGCGAC TCTTAGATCT GGTACAGCAA
AATGTAGTGA AATTTAACCA ACTGGAAATA CTCGTGTTGG ATGAAGCGGA TCGCATGTTG
GACATGGGAT TTATTCGCGA TATCAAAAAG ATCCTCGCAC TCTTACCCGC TAAGCGACAA
AACCTGATGT TCTCGGCGAC CTTCTCCGAT GAAATCCGCG AGCTCGCTAA GGGATTAGTG
AATCAGCCGG TAGAAATTTC AGTTACACCA CGCAACGCCG CGGCAAACAC AGTTAAACAA
TGGATTTGCC CCGTCGATAA AAATCAAAAA TCGGCGCTGC TGATCCAGCT CATCAAACAG
GAAGACTGGC AGCAAGTCTT AGTGTTTTCA CGCACAAAAC ACGGCGCCAA CAGACTGGCT
AAGAGTCTTA TTCAAGCCGA GATCAGCGCT GCCGCTATCC ACGGCAATAA AAGCCAAGGC
GCCCGCACCA AGGCATTAGC CGACTTTAAA AGCGGCGAAG TACGAGTGCT CGTGGCGACC
GATATTGCGG CGCGCGGACT CGATATCGAC CAATTACCTC AAGTCGTTAA CTTCGATCTG
CCCAATGTGC CAGAAGATTA TGTGCACCGT ATTGGCCGTA CAGGGCGAGC GGGGGCTTCG
GGCCAAGCCG TGTCTTTGGT CAGCAGTGAA GAATTTAAGC TGCTTCGGGA CATTGAACGT
TTAATCAACC GCGTACTTGA AAGGCAAGAA ATTGAGGGTT TCGGCCCCGC CCATGCACTA
CCGGAATCAA CCTTAATCGC TCATGGCAAA GATAACAAAG TCAAAGCGGT GGCGAGCCAA
CGTAAGCACC GCAGTGCGGG CAAACCTACG CCAAGAACCG GCACGGGTCG CGATGGTCGT
AAAACGCCAG ACAGCATCGA CGGCTCTGCG CAGCAAAAGA ACTCAAATCC AAACCAAGGC
CAGCGCAATA ATCAAGGTCA GCATAAGCGT CCTCAATCCT CAAAAAACGC TGAGCATAAA
AATACGCACT CAAGTACCGA AGCTGGTCGC ACGCCCAAAC CACAGGATAA ACGTCCTCAG
CACGGCAAAG GCCCGGCTAA TAGCGAACAT AAAGCCAAAG GCCAGCCTCA TTCAGCGGCG
CAACAACCTA GTCCACAGGC TCGCAGCGAA AAACAACATT CTGACTCACG CCGCCAAGGC
CGCACTCAGC CGACGGCGAA TTCCGCCAGC GGTGAGCACA AAAAGCCTTC GCATCGACCA
GATAACCGCC CTAATCGCGT AAAATCCTAA
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| Protein sequence | MSFSSLGLSL PIQKAVTEQG YDTPSPIQAQ AIPAVLTGKD VMAAAQTGTG KTAGFTLPLL
ELLSKGNKAK AGQIRALVLT PTRELAAQVS ESVETYGKYL PLRSAVVFGG VPINPQIQKL
RHGVDVLVAT PGRLLDLVQQ NVVKFNQLEI LVLDEADRML DMGFIRDIKK ILALLPAKRQ
NLMFSATFSD EIRELAKGLV NQPVEISVTP RNAAANTVKQ WICPVDKNQK SALLIQLIKQ
EDWQQVLVFS RTKHGANRLA KSLIQAEISA AAIHGNKSQG ARTKALADFK SGEVRVLVAT
DIAARGLDID QLPQVVNFDL PNVPEDYVHR IGRTGRAGAS GQAVSLVSSE EFKLLRDIER
LINRVLERQE IEGFGPAHAL PESTLIAHGK DNKVKAVASQ RKHRSAGKPT PRTGTGRDGR
KTPDSIDGSA QQKNSNPNQG QRNNQGQHKR PQSSKNAEHK NTHSSTEAGR TPKPQDKRPQ
HGKGPANSEH KAKGQPHSAA QQPSPQARSE KQHSDSRRQG RTQPTANSAS GEHKKPSHRP
DNRPNRVKS
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