| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0828 |
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| Symbol | |
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| ID | 4256864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 939902 |
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| End bp | 941818 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638121439 |
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| Product | peptidase U32 |
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| Protein accession | YP_736884 |
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| Protein GI | 114046334 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00452719 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGC CAGAGATTTA CACACCTGAG ACACTTTCTC ACGTTAATAA CCGCTTAGAG
TTATTGGCGC CTGCAAAAAA TGCCGATTAT GGCATTGAAG CCATTCGCCA TGGTGCCGAC
GCGGTTTATA TCGGTGGTCC CGCATTCGGC GCGCGTGCGA CCGCGGGTAA CAGTGTAGAA
GATATCGCCC GTCTGTGTAC TTTTGCTCAT AAGTATCATG CGCAAGTGTT TGTGGCCATT
AACACTATTC TGATGGACGA TGAACTCGAG ACCGCTGAAA AGCTGATTTG GGATGTGTAT
AACGCGGGCG CCGATGCACT GATTGTGCAG GACATGGGCG TATTGCAACT TAACCTGCCG
CCGATTGCGC TGCATGCTAG TACGCAAATG GATAACCGTA ATCCCGAGAA AGTCGCCTTC
TTAGAGCAAG TGGGTTTCTC ACAAGTGGTA TTGGCGCGTG AGTTAGGTTT AAGCCAAATC
CGTGAGGTTG CGGCTCACAC CAATATGCAG ATTGAGTTCT TTATTCACGG CGCCCTGTGT
GTGGCCTACA GCGGCTTATG TAACTTAAGT CATGCCTTCA GTAACCGCAG TGCAAACCGC
GGCGAATGTT CGCAAATGTG TCGTCTGCCG GGCAATCTTA AGACCCGCCA AGGGGATGTG
TTGGCGCAAA ATGAGCACTT ACTCTCATTA AAAGACAATA ACCAAACCGA TAACCTCGAA
GCCTTGATTG ATGCCGGCGT GCGCTCATTC AAAATTGAGG GGCGTTTAAA GGACTTAAGT
TACGTTAAAA ACGTGACCGC CCATTATCGT CAAAAGCTCG ATGCCATTAT GGCGCGTCGC
CCTGAGTTTG TGGCGTCATC CCATGGCCGT ACTGAACATA CCTTTACTCC GGATCCCGAA
AAAACCTTTA ACCGTGGCAG CACAGATTAC TTTGTGAATG AGCGTAGCCA AGGGATTAAA
GACTTCCGCT CGCCAAAATA TATCGGGCAA GATGTGGGTA AAGTGGTCGC CATCGGCAAA
GACTTTATTC AAGTCAGTTC AACCCACGAG TTTAATAACG GCGATGGTTT AGCCTATTTC
CCGCCAAACT ATGCGATGGC CAAACAGTCC GATGACAAAT TGCAGGGACT GCGTGTTAAC
CGTGCCGAAG GTCATAAGCT GCATGTATTG CAGGTGCCGC GCGATCTGCG TGTTGGTATG
ACCTTATACC GTAACCATAA CCAAGCTTTC GAGACGTTAC TTTCTAAGGA GTCAGCCAAG
CGTATTATCG GCGTCGACAT GCGTTTAACC GATACTGCTA CGGGCGTGGC GCTGACCTTA
ACGGATATTT ACGGCCTCAG TGCGACGGTT GAGCTTGCAG TCGAAAAGAC GCCCGCCACC
GACGCTGAAA AAACCTTGCA GACTATCCGT ACTCAATTGT CTAAGCTGGG CAGTACCGAT
TTTACTGCGC GCCAGATCAG TATCGAAACT GCCGAGCCTT GGTTCCTGCC TGCATCTGTC
CTCAACGGCC TGCGCCGTGA TGCGGTCGCA GCATTAGAAC TTGCCCGTGT TGAAGGTTAC
CAGCGTCCAA AACCTTGGAA ATATAATCAA GATGCCGTCT ATCCATTCAA ACACTTAAGT
TACTTGGGTA ACGTGGCAAA CGAAAAGGCG AAGGACTTTT ATCAACGCCA TGGCGTGATT
GAAATTCAGG ACACCTACGA GAAAAACGGC GTGACCGAAG ATGTGCCGTT AATGATCACT
AAGCATTGCC TGCGATTTAA CTTCAATCTC TGTCCTAAGG AAGTGCCGGG CATTAAGGCG
GATCCTATGG TGCTTGAGAT AGGTAACGAT GTGCTTAAGT TAGTTTTCGA TTGTCCAAAA
TGCGAGATGA TGGTCGTCGG TGAAAACCGT CAGGTTCGCG GTCAAAAAGC CGTTTAA
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| Protein sequence | MSQPEIYTPE TLSHVNNRLE LLAPAKNADY GIEAIRHGAD AVYIGGPAFG ARATAGNSVE
DIARLCTFAH KYHAQVFVAI NTILMDDELE TAEKLIWDVY NAGADALIVQ DMGVLQLNLP
PIALHASTQM DNRNPEKVAF LEQVGFSQVV LARELGLSQI REVAAHTNMQ IEFFIHGALC
VAYSGLCNLS HAFSNRSANR GECSQMCRLP GNLKTRQGDV LAQNEHLLSL KDNNQTDNLE
ALIDAGVRSF KIEGRLKDLS YVKNVTAHYR QKLDAIMARR PEFVASSHGR TEHTFTPDPE
KTFNRGSTDY FVNERSQGIK DFRSPKYIGQ DVGKVVAIGK DFIQVSSTHE FNNGDGLAYF
PPNYAMAKQS DDKLQGLRVN RAEGHKLHVL QVPRDLRVGM TLYRNHNQAF ETLLSKESAK
RIIGVDMRLT DTATGVALTL TDIYGLSATV ELAVEKTPAT DAEKTLQTIR TQLSKLGSTD
FTARQISIET AEPWFLPASV LNGLRRDAVA ALELARVEGY QRPKPWKYNQ DAVYPFKHLS
YLGNVANEKA KDFYQRHGVI EIQDTYEKNG VTEDVPLMIT KHCLRFNFNL CPKEVPGIKA
DPMVLEIGND VLKLVFDCPK CEMMVVGENR QVRGQKAV
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