| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0825 |
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| Symbol | |
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| ID | 4256861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 934619 |
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| End bp | 938395 |
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| Gene Length | 3777 bp |
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| Protein Length | 1258 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638121436 |
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| Product | protease domain-containing protein |
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| Protein accession | YP_736881 |
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| Protein GI | 114046331 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.184637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAATA AAATTGCGCT CGCAGTATCA GCCGCACTAT TATCGATGGG AGCTTCAGCC
GGTAATATCT CCCACAACGT TGCAAATGTT ACAGTCTCCA AACCCTCTAA TGTTTTAGAT
CAAATTCAAG TTCAACACTC TAAACCAACT GCTACAGTTG TCGGTATGAC GCAAGCAGTT
TTCACTCCTG AAGCTGATTT GGCGCCTGGT AAGTATCGTT ACTTTGTGCG TTTAGTTGAT
AGCCCTGTCG CTTTGTACGA GGGTGGAGTC GAAGGTTTTA AAGCAACCAG CCCTGAAAAA
AATCAAACTC GCAAACTTGA CGTAAAGAGT GCTGAAGTTA AATCATACCG TCAGTATCTT
AATAATCAGC AAGATAGCTT TATTGCGAAG GCTAAATCTA TAGTCGGTGA ACTGAATGTT
CAACAAAGAA CATCCTTAGC CTATAACGGC TTGGTTGTTG AAATGTCACA AAACGATGCG
ATTAAATTAG CTAAAGTAGC AGGTGTGGTT CATATTCAGC GCGAAACGTT ACGTTATGTT
CAGACTGATT CAGGTCCAAA CATCATCAAG GCTCCCACCA TTTGGAGTGG CGATGCTACT
GGTGTAGCGA CAAAGGGTGA AGGCATGATC GTGGGTATCA TTGATACCGG CGTTAACACA
GACCACCCTT CTTTCGCGGA CAAGGGGGGG GATGGTTATG ACCACACTAA CCCTTGGGGT
GAGAATAACT ACTCTGGTGA CTGTAAAGCT GATTTCCCTG AATTATGTAA TGATAAATTA
ATTGGGGTTC ACAGCTGGCC TGCTGTGACC AAATTGTATC TTGATTATGA TGTGACAGTG
CCAGCCAATG GTGAGGATCA CAATGGACAC GGTTCGCATA CTGCAAGCAC TACAGCGGGC
AACGTGTTAG TTAATCAAAA TGTGCCTGAT GTTGATGGTA AAGACTCTGG CGTGGTATTT
GAACAGGTTT CAGGTGTCGC TCCACATGCC AACATTGTTT CATATCAAGT TTGTTTACCA
GGTGAGAAAG ATAAGATCAA TTTTGCAGGC TGTTTACCCT CTTTGACAGT GCTTGCTGTT
GAGCATGCGA TTGAAAATGG CATTGACGTA TTAAACTATT CAATCGGTGG TGGTTCTAGC
AACCCTTGGC AAGATGCTGA CGCATTAGCA TTTTTAGCTG CTCGTAAAGC GGGTATTCAT
GTAGCAACTT CGGCGGGTAA TGATGGTCCA GATGCGGGTA CAGTGGGTTC TCCTGGCGAT
GCTCCTTGGA TTACAACTGT TGCCGCTTAT ACTCATGACC GCGATTTCTC TGATAAAACA
CTTGGTGGTT TTACTGGTGG TAACACCCCT GTGCCAGAAA CACTAACTGG TAAAGCAATT
ACTGGTGCTT ATAGCGGCAA AATTGTTTAT GCAGGTGATT TTACAAACGC TAATGGCCCT
GGTGAAGATC CTGCGCAATG CTTAAAACCA TTCCCAGCTA ATACTTTTGC TGCGGACACT
ATTGTTGTGT GTGACCGTGG TGAAATTGCC CGCGTTGATA AAGGTCGTAA CGTAAAAGCA
GGCGGAGCGG CAGCTATGGT GTTGGCAAAC GTCACTGGTG GTGCTGATAG TGTTGTTGCA
GATGCTCATG TATTACCAGC GATTAATATC AATGCTGCTC AAGGCGATAA GTTACGCGCT
TGGCTAGCTA GCGGTGAAGG CCATACTGCT ACTATTTCTG GTTCTGAGGT CATACATGAT
GACAAGTTAG CTCGCATCGC GGCAGAGTTT ACTTCTCGTG GGCCAAATAA GTCTGTACCA
AACGTGATTG CACCATCAAT TGCGGCACCA GGTGTGAACA TTTTTGCTGC TTATGCTGAT
TCACAGTCAG CTGGCTTTAA AGAAAACCCA GATCCTAGTG ATTTTGGTTT CTTAAGCGGA
ACCTCTATGG CGAGTCCGCA TATTGCAGGT GCGTTAACCT TGCTTGCTAA AATTCACCCT
ACGTGGACAC CGGCAGAAAT TCAATCTGCA TTAATGCTAA CTGCAAACCA AAATACGCTG
AAAGAAGACG GTAAAACACC TTCAGATTTC TTCGATATGG GCGCAGGTTT TGCCAACCTG
GAAGCTGCTG CTAAGACTGG TTTGGTGATG GATGAGTCTT ATGCTAACTA CCTAAAAGCA
GACCCTATGG TTGGTGGTAA ACCTGAAGCA ATTAACCTGC CGACAATGGC AAATGCTGCT
TGTGTTGATA AGTGCACTTG GACCCGTGTT GTAAAAGCAA CTGTAGCAGG CAGCTGGAAA
GCCTCTGCTG TGGGTATGAT TGATGGTTTT GCGCTTACAG TATCGCCTGC AGAATTTACC
TTAGCTGCTG GAGAAACTAA AGCATTAACT ATTACTGCTG ATGTATCTGC GGCAGATGAA
GGTTGGAATT TCGCCAACAT TAAATTGGTG GCAGACAACT TACCTGAGGT TAAGCTGCCT
GTGGCTGTTA AAGCTGAAGG TAATAACTTA CCTGATAGCA TTAACCTTGA AGCAGGGCGC
GCACAAGGTA GCATGACGTA CAGTGGTTAT GTCGTTAAGG GACAAACTGG CATGTCTATC
AATGTCTATG ACAAGGCAAC AGACTTGATT GAGCCTAGTA CCCTTAAAGT TCCTGATGGT
GATTTAGATT ATATAGCTGT GACTTTCCCT GAAGATTTGC CGAATGTTCA GTTCAAAATT
TCTTCTGAAA CTGCGCCAGA TGTTGATCTA CGTATTCTGA ACTCTTCTTT TGTTAAGATA
GGTTCAAGTG CTGGTCCAAA TTCAGATGAA GTTGTTTCGT TCACAGATTT TCCAGCGGGT
AAATACTACG TGGTTGTCGA TGGATATACC GCTTCTGCCC CTGGCGCAGT AGATGATGTA
TTAGTTGAAA TATCTTCTGT TATGTTTGAT GCGGATTCAC TTAGTGACTC GGTAATGACG
AAAGTGTCAG AGTCAGACGG TGAGATTAGC ATTACTTTTG ATTGGAATAC CAAGCAAAAT
ACAGCAGGTA TTTTAGCGGC ACTCGCTAGC GATGGTAGTG TGATAAAGCA GATTCCATTC
AAGCTAACAC GTAAAGACGA CGTGACTGTT TCTACTGACC TCTCTAATAC TATGGTTGCG
GGTGAAGCGA GCCACATTAG CTTTGATATT GAGCCTAACT TAACTTCTGA AGATAAAGTG
TATTCGTTAG AAGCGCTATT ATCTCAGGGT CATGAAATTA CGAATATTAG TCATGATGGA
GTATTAACTG ATACCAGTAT TACATGGTCA GTGACTCAGC CGGCTGGTTC GAGTGAAATC
ATGTCAGTTG GCTTTGATCT CATTCCCCGT AAGTCTGGCG AATTCTTTGG TATCAATCTA
TCGAATACCT TAGGCGATGA TACCGTCGAA GTTCAGCGTC AATTTGGCGT TATCCAAGTC
GCTCCCGTGG CAGATATTTC TGCCCCTGCA AAAGTGAAGG AAGGTGCGAC AGTGGCGATT
TCAGGTAAAG GGTCGTCAGA TGCTAATAAC GATGCTTTAA CCTATAAATG GGTTCAAACA
GCGGGTGCTG TAGCTACATT CAATGCTACC ACCAGTGACA TTAGCTTCAC TGCTCCCTCA
GTACCGCCTG AAGGTGAAAC ACTGTCATTT GAACTGACTG TTTCAGATAG CCATGGCAAC
ATGGATACTA AGACAGTCTC TGTGATGGTT GAAAACCAGC CTGAAGATGG TGGCTCACTT
GGTTGGTTAA GTTTGTTAAT GCTACCAGCT GTGTGGTTAC GTCGTAAAAT TAAGTAA
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| Protein sequence | MKNKIALAVS AALLSMGASA GNISHNVANV TVSKPSNVLD QIQVQHSKPT ATVVGMTQAV
FTPEADLAPG KYRYFVRLVD SPVALYEGGV EGFKATSPEK NQTRKLDVKS AEVKSYRQYL
NNQQDSFIAK AKSIVGELNV QQRTSLAYNG LVVEMSQNDA IKLAKVAGVV HIQRETLRYV
QTDSGPNIIK APTIWSGDAT GVATKGEGMI VGIIDTGVNT DHPSFADKGG DGYDHTNPWG
ENNYSGDCKA DFPELCNDKL IGVHSWPAVT KLYLDYDVTV PANGEDHNGH GSHTASTTAG
NVLVNQNVPD VDGKDSGVVF EQVSGVAPHA NIVSYQVCLP GEKDKINFAG CLPSLTVLAV
EHAIENGIDV LNYSIGGGSS NPWQDADALA FLAARKAGIH VATSAGNDGP DAGTVGSPGD
APWITTVAAY THDRDFSDKT LGGFTGGNTP VPETLTGKAI TGAYSGKIVY AGDFTNANGP
GEDPAQCLKP FPANTFAADT IVVCDRGEIA RVDKGRNVKA GGAAAMVLAN VTGGADSVVA
DAHVLPAINI NAAQGDKLRA WLASGEGHTA TISGSEVIHD DKLARIAAEF TSRGPNKSVP
NVIAPSIAAP GVNIFAAYAD SQSAGFKENP DPSDFGFLSG TSMASPHIAG ALTLLAKIHP
TWTPAEIQSA LMLTANQNTL KEDGKTPSDF FDMGAGFANL EAAAKTGLVM DESYANYLKA
DPMVGGKPEA INLPTMANAA CVDKCTWTRV VKATVAGSWK ASAVGMIDGF ALTVSPAEFT
LAAGETKALT ITADVSAADE GWNFANIKLV ADNLPEVKLP VAVKAEGNNL PDSINLEAGR
AQGSMTYSGY VVKGQTGMSI NVYDKATDLI EPSTLKVPDG DLDYIAVTFP EDLPNVQFKI
SSETAPDVDL RILNSSFVKI GSSAGPNSDE VVSFTDFPAG KYYVVVDGYT ASAPGAVDDV
LVEISSVMFD ADSLSDSVMT KVSESDGEIS ITFDWNTKQN TAGILAALAS DGSVIKQIPF
KLTRKDDVTV STDLSNTMVA GEASHISFDI EPNLTSEDKV YSLEALLSQG HEITNISHDG
VLTDTSITWS VTQPAGSSEI MSVGFDLIPR KSGEFFGINL SNTLGDDTVE VQRQFGVIQV
APVADISAPA KVKEGATVAI SGKGSSDANN DALTYKWVQT AGAVATFNAT TSDISFTAPS
VPPEGETLSF ELTVSDSHGN MDTKTVSVMV ENQPEDGGSL GWLSLLMLPA VWLRRKIK
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