| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0824 |
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| Symbol | |
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| ID | 4256860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 933018 |
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| End bp | 933788 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638121435 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_736880 |
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| Protein GI | 114046330 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGC TGTATTTTAT CGCCTTCAAA AGCATATTAA CTAAGGAAAT CAATCGTTTT
ACCCGGATCT GGATCCAGAC CTTAGTTCCG CCTGCAATCA CTATGACCTT GTATTTTTTG
ATTTTTGGTA ACTTGGTCGG TAGCCGGATT GGCGATATGG GTGGCGTATC TTATATGGAG
TTTATTGCGC CTGGTCTAAT CATGATGTCG GTGATTACTA ACTCCTATTC GAATGTGGCG
AGCTCTTTCT ATAGTGCGAA ATTTCAGCGT AATCTCGAGG AGTTAATGGT CGCGCCCGTG
CCTCACTATG TGATGATCGC AGGTTATATA GGTGGCGGTG TCGCTCGGGG CTTATGCGTT
GGTTTAATCG TGACGCTAGT CGCCATGTTC TTTGTCGACA TCAGTTTGCA CCATGCAGGC
CTTGTCGTCA TGACGGTATT TTTAACCTCA GTGTTGTTCT CCTTGGGTGG ATTAATTAAT
GCCGTATTTG CTAAGAGTTT CGATGATATC AGCATCATCC CGACTTTTGT GCTCACGCCC
TTAACCTACC TAGGCGGAGT ATTCTATTCA CTGTCGTTGT TACCATCCTT TTGGCAAGGC
GTTTCGGCAC TGAACCCTGT GGTCTATATG ATCAACGTCT TCCGTTACGG TTTCTTAGGT
TTTGCCGATA TCAGCGTCCC GCTTTCTATT GGCATCATGG TGGGCTTTTG TGCCGTACTC
TGGGGTGTTG CGTATTACCT AATCTCACGG GGAATTGGGT TGCGTTCGTA G
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| Protein sequence | MKQLYFIAFK SILTKEINRF TRIWIQTLVP PAITMTLYFL IFGNLVGSRI GDMGGVSYME
FIAPGLIMMS VITNSYSNVA SSFYSAKFQR NLEELMVAPV PHYVMIAGYI GGGVARGLCV
GLIVTLVAMF FVDISLHHAG LVVMTVFLTS VLFSLGGLIN AVFAKSFDDI SIIPTFVLTP
LTYLGGVFYS LSLLPSFWQG VSALNPVVYM INVFRYGFLG FADISVPLSI GIMVGFCAVL
WGVAYYLISR GIGLRS
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