| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0820 |
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| Symbol | |
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| ID | 4256856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 929259 |
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| End bp | 930656 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638121431 |
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| Product | UDP-N-acetylmuramate |
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| Protein accession | YP_736876 |
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| Protein GI | 114046326 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.700017 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGTAC ATATTTTAGG AATTTGTGGA ACCTTCATGG GTGGCCTAGC ACTCTTGGCT
AGGGCAAAAG GGCACAGAGT GACAGGCTCG GATGCCAACG TCTATCCACC GATGAGTACG
CAGCTTGAAG AGCAAGGTAT TGAACTTATT CAAGGTTTTG ACCCAAGTCA GTTAGGTGAA
GCGGGTAGTT ATCCCGATCT TGTGGTGATT GGTAATGCCA TGAGCCGAGG CAATCCTTGT
GTCGAAGCGG TATTAAACCT TGGGATCCCT TACACCTCTG GACCGCAGTT TTTAGCCGAT
CATATTCTGC CTGAGCGTTG GGTGTTAGCC GTGTCTGGTA CCCATGGAAA GACTTCCACT
TCAAGCATGC TGGCGTGGAT TTTAGAGGAT TGTGGTTATC AACCCGGTTT CTTGATTGGC
GGTGTGCCGC AAAACTTTGG CGTGTCGGCT CGTTTAGGGG AATCGGCGTT TTTTGTGGTC
GAAGCCGATG AATACGACAG CGCCTTCTTC GATAAGCGTT CTAAATTTGT GCATTATCAT
CCCCGTACGC TGGTGATCAA TAACCTCGAA TTTGACCATG CCGATATTTT TGCCGATTTA
GCGGCGATCC AAAAACAGTT CCATCATCTG ATCCGTACCG TGCCAGGGCA AGGCAAAGTG
ATTTGGCCTG CCGATTCCCA CGCGGTAAAA CAAACCATTG AGATGGGCTG CTGGAGCGAG
CAAGAGACTT TCCACATCGC TGAGGTGACT AAGGGTTGGC ATGCTAAGGC CTTAAGTGAT
GATTGCCACG AGTTTGAAGT CTTCTTCGAC GGCGAATCCC AAGGTGTGCT CGAGTGGGCT
TTGATTGGTC AGCACAATAT CGAAAACGCT ATGATGGCGA TTGCAGCTGC GCGCCATGTT
GGGGTTAAAC CGAGTGCTGC TATTGCAGCA TTAACCCGCT TTGTACCGCC TAAGCGTCGC
CTGGAGCTGT TAGGAACTGT TCACGGTGTC AGTGTATACG ATGATTTTGC TCACCATCCG
ACGGCGATTG CGACAACAAT CAAAGGTATA CGTGCCAAAG TTGGTCAAAG CAAAATTACT
ATCGTATTAG AGCCGCGCTC GAACACGATG AAGAGTGGTG TTCACAAAGA CACGCTGGCC
CATTCTATGC TGCAAGCGGA TGAAGCCTTT TTATATCAAG CTGATACTAT CGATTGGAAT
ATGAAAGAGG CGATGGAAGC GGCGGTGATC CCTGTGACTG TCTTGCACCA AATTGATGAT
GTTGTCGCTA AAGTATCTGC CTCGGCCAAA GCGGGTGACA CAATCGTGGT GATGAGTAAC
GGCGGCTTTG GCGGCTTACA TAAGAAACTG TTGGCGGCGC TCGAAGTCAG CCCGCAGTTT
GTTCAGCAGG CGGACTAA
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| Protein sequence | MHVHILGICG TFMGGLALLA RAKGHRVTGS DANVYPPMST QLEEQGIELI QGFDPSQLGE
AGSYPDLVVI GNAMSRGNPC VEAVLNLGIP YTSGPQFLAD HILPERWVLA VSGTHGKTST
SSMLAWILED CGYQPGFLIG GVPQNFGVSA RLGESAFFVV EADEYDSAFF DKRSKFVHYH
PRTLVINNLE FDHADIFADL AAIQKQFHHL IRTVPGQGKV IWPADSHAVK QTIEMGCWSE
QETFHIAEVT KGWHAKALSD DCHEFEVFFD GESQGVLEWA LIGQHNIENA MMAIAAARHV
GVKPSAAIAA LTRFVPPKRR LELLGTVHGV SVYDDFAHHP TAIATTIKGI RAKVGQSKIT
IVLEPRSNTM KSGVHKDTLA HSMLQADEAF LYQADTIDWN MKEAMEAAVI PVTVLHQIDD
VVAKVSASAK AGDTIVVMSN GGFGGLHKKL LAALEVSPQF VQQAD
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