Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0676 |
Symbol | |
ID | 4254987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 795739 |
End bp | 797091 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638121289 |
Product | peptidase Do |
Protein accession | YP_736735 |
Protein GI | 114046185 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.30411 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00175979 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAACGA AACTATCTGT ACTTTCAGCC GCAATGTTAG CCGCAACTCT GACAATGATG CCCGCTGCCT CACAGGCCGC TATTCCGCAA TCTGTTGAGG GTCAATCCAT TCCAAGTCTT GCGCCTATGT TAGAGCGCAC GACGCCCGCC GTGGTTTCAG TGGCGGTATC TGGCACGCAC GTATCCAAAC AACGTGTACC CGATGTGTTC CGTTATTTCT TCGGCCCCAA TGCACCACAG GAACAAGTGC AAGAGCGTCC TTTTAGAGGT TTAGGCTCAG GCGTGATTAT CGACGCGGAT AAAGGCTATA TCGTCACCAA CAACCATGTG ATCGACGGTG CCGATGATAT CCAGGTCGGT CTGCACGATG GCCGTGAAGT CAAAGCCAAG CTGATTGGTA CCGACTCAGA GTCCGACATT GCCTTGCTGC AAATCGAAGC GAAAAATCTA GTCGCAATCA AAACCTCAGA TTCTGATGAA CTGCGCGTGG GTGACTTTGC CGTCGCCATT GGTAACCCCT TTGGTTTAGG TCAAACCGTC ACATCAGGGA TCGTCAGCGC CCTAGGCCGT AGCGGTTTAG GCATTGAAAT GCTTGAAAAC TTTATCCAAA CCGACGCAGC GATTAACAGC GGCAACTCGG GTGGTGCGCT AGTAAACCTG AAAGGTGAGC TGATCGGTAT TAACACCGCC ATCGTAGCGC CTGGCGGTGG TAACGTGGGT ATCGGTTTTG CGATCCCCGC CAATATGGTG AAAAACCTCG TGGCACAAAT TGCCGAGCAC GGTGAAGTTC GCCGTGGCGT ACTGGGGATT TCGGGCCGCG ACCTAGATAG CCAACTCGCC CAAGGTTTTG GTTTAGATAC CCAGCACGGT GGGTTTGTGA ATGAAGTTAC CGCGGGCAGC GCAGCTGAAA AAGCCGGCAT CAAGGCGGGT GATATTATCG TCAGTGTCGA TGGCCGTGCG ATTAAATCGT TCCAAGAGCT GCGTGCGAAA GTCGCGACTA TGGGCGCTGG TGCTAAGGTT GAACTGGGAC TTATCCGCGA TGGCGATAAG AAAACCGTGA ATGTCACCTT AGGTGAAGCA AGCCAAACCA CTGAAAAAGC TGCAGGTGCT GTGCACCCCA TGTTACAAGG TGCCTCGCTA GAAAACGCTT CGAAAGGGGT GGAAATTACT GAGGTGGCCC AAGGCTCGCC TGCGGCAATG AGTGGCTTAC AAAAAGGCGA TGTGATTGTC GGTATTAACC GTTCGGCGGT GAAAGATCTG AAATCACTCA AGGAGCAGCT CAAAGATCAA GAAGGCGCTG TCGCCCTGAA GATCCTCCGT GGTAAGAGCT TGTTGTACTT AGTGCTGCGT TAA
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Protein sequence | MKTKLSVLSA AMLAATLTMM PAASQAAIPQ SVEGQSIPSL APMLERTTPA VVSVAVSGTH VSKQRVPDVF RYFFGPNAPQ EQVQERPFRG LGSGVIIDAD KGYIVTNNHV IDGADDIQVG LHDGREVKAK LIGTDSESDI ALLQIEAKNL VAIKTSDSDE LRVGDFAVAI GNPFGLGQTV TSGIVSALGR SGLGIEMLEN FIQTDAAINS GNSGGALVNL KGELIGINTA IVAPGGGNVG IGFAIPANMV KNLVAQIAEH GEVRRGVLGI SGRDLDSQLA QGFGLDTQHG GFVNEVTAGS AAEKAGIKAG DIIVSVDGRA IKSFQELRAK VATMGAGAKV ELGLIRDGDK KTVNVTLGEA SQTTEKAAGA VHPMLQGASL ENASKGVEIT EVAQGSPAAM SGLQKGDVIV GINRSAVKDL KSLKEQLKDQ EGAVALKILR GKSLLYLVLR
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