Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0646 |
Symbol | |
ID | 4256089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 754648 |
End bp | 755559 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 638121260 |
Product | ribokinase |
Protein accession | YP_736706 |
Protein GI | 114046156 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | [TIGR02152] ribokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.497411 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCACA TACTCGTTAT AGGCAGTGCC AACGCCGACC ATGTTATGAA TTTTGAGTAT TTGCCCGCTC CGGGGCAGAC CTTAATGAGT CGAAGCTACC GACTAGAGCA TGGTGGTAAA GGGGCGAATC AAGCGGTGGC CTGTGCCCGC TTATGTCAGG CCGATTCTCG AGTGGATTTT ATTTGCCATT TGGGCCAAGA CAGCGTGGGT AACGAGATGC GCGAAAACTG GCTCAAGGAT GGAATAGAAG CCGATGGCAT TACCCAAGTC GCCAATCTGA GTACAGGTAC GGCGATGATT TTTGTCGCCG ATAATGGCGA AAACTCCATC GGCATCGCCG CTGGCGCCAA TGCTAATCTC ACGCCACCAG AGCTTGAGAA ACATTACGCT CTGTTTGTAA ATGCCCAGTA CATGCTGATC CAACTCGAAA CGCCAATGGA GACAGTAAAC CACGCATTGC AAACCGCCAA ACGCCTTGGC ATTACCACAG TGCTCAACCC CGCCCCTGCT GTCAGCCAAG AACTGGATTA TCTCAAGTGG GTGGACATTA TCACCCCGAA TGAAACCGAG GCCGAAGCGT TAACGGGCAT TGAGGTCAAT AACGAAGATG ATGCCAAACT GGCCGCCCAA CTGCTGCATC AACAGGGCGT GACGACTGTG GTGATTACCT TAGGCAGTAA AGGGGCATTT ATCAGTAGCG CAGGCTTTAC CGGATTAATT CCTGCACTTG AAGTACAAGC TATAGACACA GTTGCCGCTG GCGATACCTT CAATGGCGCC TTAGTGGTGG GGTTAAGTGA GGGCATGTCG ATTGCCGCCG CCGTCGGCTT TGCCAACGCC GCATCCGCGA TCACTGTGAC CCGCGCCGGC GCTCAGCGCG CCATTCCCTA CCGCCACGAA CTGCCGCGTT AA
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Protein sequence | MSHILVIGSA NADHVMNFEY LPAPGQTLMS RSYRLEHGGK GANQAVACAR LCQADSRVDF ICHLGQDSVG NEMRENWLKD GIEADGITQV ANLSTGTAMI FVADNGENSI GIAAGANANL TPPELEKHYA LFVNAQYMLI QLETPMETVN HALQTAKRLG ITTVLNPAPA VSQELDYLKW VDIITPNETE AEALTGIEVN NEDDAKLAAQ LLHQQGVTTV VITLGSKGAF ISSAGFTGLI PALEVQAIDT VAAGDTFNGA LVVGLSEGMS IAAAVGFANA ASAITVTRAG AQRAIPYRHE LPR
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