| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0610 |
|---|
| Symbol | |
|---|
| ID | 4257293 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 713048 |
|---|
| End bp | 713989 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638121224 |
|---|
| Product | Dyp-type peroxidase family protein |
|---|
| Protein accession | YP_736670 |
|---|
| Protein GI | 114046120 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2837] Predicted iron-dependent peroxidase |
|---|
| TIGRFAM ID | [TIGR01413] Dyp-type peroxidase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATTC AAAATATGCC GCGTGAACAG TTGGGTGTGT GTGCAGAGGG AAACTTACAT
AGCGTCTATT TGATGTTTAA TGCGAGCGAC AACGATAACG TTGAATCGCA ATTGCGTCCC
TGTATTGCCA ACGTTGCGCA GTATATTTAT GAGTTGACGG ATCAATATTC CGACAGCGCA
TTCAATGGTT TTGTGGGCAT AGGCGCCAAC TATTGGGACA GCCTCTATCC CGATGCTCGC
CCCGAAATGC TCAAACCATT CCCAGCGATG CAAGCGGGTA ACCGTGAGGC GCCTGCGATC
GAATACGATT TGTTTGTGCA TATTCGCTGC GACCGCTACG ACATTTTGCA TTTAGTCGCC
AACGAAATCA GCCAAATGTT CGAAGACTTA GTCGAGTTAG TCGAAGAGGA ACGCGGCTTT
AGATTTATGG ATAGCCGCGA CTTAACGGGC TTTGTGGATG GCACTGAAAA CCCTAAAGGA
CGCCATCGTC AAGAGGTCGC TTTAGTCGGG GATGAAGATC CTGAATTTAA AGGTGGCAGC
TACATTCACG TGCAAAAGTA CGCCCACAAC TTGAGTAAGT GGCATAGATT ACCGCTTAAA
AAGCAAGAAG ATATTATTGG TCGCACCAAG CAAGACAATA TCGAATACGA GTCGGAAGAT
AAGCCATTAA CCAGCCATAT CAAGCGGGTA AACCTCAAGG ATGACAACGG CAAGTCGATT
GAGATTTTGC GCCAGAGCAT GCCTTACGGT TCGCTCAAGG AGCAAGGGCT GATGTTTATT
TCAACCTGCC GTACGCCAGA ACACTTCGAA AAGATGCTTC ATAGCATGGT GTTTGGCGAT
GGTGCGGGTA ATCACGACCA CCTGATGCAC TTCACCAGCG CATTGACGGG CTCTTCTTTC
TTCGCCCCAA GCTTAGATTT TTTGATGCAA TTCGATAATT AA
|
|---|
| Protein sequence | MDIQNMPREQ LGVCAEGNLH SVYLMFNASD NDNVESQLRP CIANVAQYIY ELTDQYSDSA
FNGFVGIGAN YWDSLYPDAR PEMLKPFPAM QAGNREAPAI EYDLFVHIRC DRYDILHLVA
NEISQMFEDL VELVEEERGF RFMDSRDLTG FVDGTENPKG RHRQEVALVG DEDPEFKGGS
YIHVQKYAHN LSKWHRLPLK KQEDIIGRTK QDNIEYESED KPLTSHIKRV NLKDDNGKSI
EILRQSMPYG SLKEQGLMFI STCRTPEHFE KMLHSMVFGD GAGNHDHLMH FTSALTGSSF
FAPSLDFLMQ FDN
|
|---|
| |