Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0592 |
Symbol | |
ID | 4254957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 694531 |
End bp | 695781 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638121206 |
Product | Rh family protein/ammonium transporter |
Protein accession | YP_736652 |
Protein GI | 114046102 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0004] Ammonia permease |
TIGRFAM ID | [TIGR00836] ammonium transporter [TIGR03644] probable ammonium transporter, marine subtype |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGAAC TAACAAAATT AGGCGTGACA GTCTCTGAAC TGCGCTTTGC ACTCGACACC TTTTATTTTT TGATTTCAGG CGCTTTGGTT ATGTGGATGG CGGCGGGTTT TGCCATGCTC GAAGCCGGCC TAGTGCGCTC TAAAAATACC ACCGAAATTT TAACTAAAAA CGTGGTGTTA TACGCGATTG CCTGTGTGAT GTATCTATTG GTTGGTTACA ACATTATGTA CGTCGACAAT GCTGAAGGCG GTTGGTTGCC TTCACTCGGT ACGCTGATTG GCTCACAAGC CGAAGATGCA AACCATGCTT TAGAATCTGA CTTCTTCTTC CAAGTGGTGT TTGTGGCAAC GGCGATGTCG ATTGTCTCTG GTGCCGTGGC GGAGCGGATG AAGTTATGGG CTTTCCTGTT CTTCTCCGTG GTGATGACAG GCATTATCTA CCCTGTTGAA GGCTACTGGA CTTGGGGTAA AGGCTTTATC TCTAGCTTAG GTTTTGTGGA CTTTGCGGGT AGCGGTATTG TGCATATGAC AGGTGCCGCG GCGGCTATCG CTGGGGTGTT ACTGCTCGGT GCTCGTAAGG GTAAATACGG TCCTAACGGC CAAGTGAACC CAATCCCAGG CTCTAACCTG CCAATGGCAA CCTTAGGGAT GTTTATCCTG TGGATGGGCT GGTTTGGTTT CAACGGTGGC TCACAATTAA TGGTTTCAGA TGCAGCCAAC GCTAGCTCTG TCGCTAAAGT CTTCGTGAAC ACCAACACCG CGGCCGCTTT TGGTGCTATC TCTGCCCTAG TTGTGTGCAA AATGATTTGG GGTAAAGCGG ACTTAACCAT GATCTTAAAC GGCATTCTGG CGGGCTTAGT GGCGATTACA GCCGATCCGC TGTCGCCTTC GCTGCTGATG GCGGGTGTGA TTGGTGTGGT TGCTGGTGGT TTAGTGGTGT TCTCTATCGT GGGTCTGGAC AGAATCAAGA TCGACGACCC AGTGGGCGCG ATTTCTGTGC ACGGTGTTGC GGGTTTCCTC GGTTTGATGT GTGTACCTTT ATCGAATGCC GACGCCACTA TCACGGCGCA ATTAACTGGC GCAGCGATTA TCTTCGCATG GGTATTTAGC GCGTCGTTTG CGGTGTGGTT TGTACTGAAG ATGACTATGG GCATTCGTGT CTCTGAGGAA GAAGAATATA ACGGTATGGA TGCATCTGAT TGTGGTATCG ACGCTTACCC AGAGTTTGTG ACTGTCAAAA GTGCAGGCTA A
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Protein sequence | MEELTKLGVT VSELRFALDT FYFLISGALV MWMAAGFAML EAGLVRSKNT TEILTKNVVL YAIACVMYLL VGYNIMYVDN AEGGWLPSLG TLIGSQAEDA NHALESDFFF QVVFVATAMS IVSGAVAERM KLWAFLFFSV VMTGIIYPVE GYWTWGKGFI SSLGFVDFAG SGIVHMTGAA AAIAGVLLLG ARKGKYGPNG QVNPIPGSNL PMATLGMFIL WMGWFGFNGG SQLMVSDAAN ASSVAKVFVN TNTAAAFGAI SALVVCKMIW GKADLTMILN GILAGLVAIT ADPLSPSLLM AGVIGVVAGG LVVFSIVGLD RIKIDDPVGA ISVHGVAGFL GLMCVPLSNA DATITAQLTG AAIIFAWVFS ASFAVWFVLK MTMGIRVSEE EEYNGMDASD CGIDAYPEFV TVKSAG
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