| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0546 |
|---|
| Symbol | dipZ |
|---|
| ID | 4258522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 633131 |
|---|
| End bp | 634972 |
|---|
| Gene Length | 1842 bp |
|---|
| Protein Length | 613 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638121160 |
|---|
| Product | thiol:disulfide interchange protein precursor |
|---|
| Protein accession | YP_736606 |
|---|
| Protein GI | 114046056 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4232] Thiol:disulfide interchange protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0488882 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.137935 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC TACTTAGCCT TATTTTCACC GCGTTACTGT TCCTTACGCC TCTCACCCTA
AGTGGCAACG CCTTCGCCAA TAGCTTTGGT TTTCTAAAAA GCGAACCCGA GTTAATGCCC
GTCGATCAAG CCTTTGCCTT CGATTTTAAG CAAGAAGGTA ATAAGGTCAC CCTCAATTGG
GTGATTGCCG ATGGCTATTA TATGTATCGG GATAAGCTCA AATTTAGCGT CAATGGCGCC
GAACTTGGCA CCATCGACCT GCCAAAGGGT AAACCCCATA ACGACGAATA TTTCGGTGAG
CAAGAGGTTT ACTACACCTA TATCGATATT CCCGTTGGCC TGAAACAAGC CGATGATAAC
GGCACTTTAA CCGTGACCTT TATGGGCTGC GCCGAGGGTA AACTCTGTTA TCCACCGACC
AAACGTGATG TGACCCTAAA AGCCGTCGCG GCCAATGATG GGCAAATCGC AACGGGTGCA
GACAGCAGCG AAACGACTGA ACCTACCGCC ACTGCTGACG CTAAGCAAAC AGGCAGCGCC
CTAAGCCAAC CTATTACTCA GCAGGACAGC CTAAGCCAGA TGCTGTCTAA CGACAGTTTA
CTCTGGACCT TAGTGATCTT CTTCGGCCTA GGGATTGGTC TGGCGCTCAC GCCTTGCGTC
TTCCCTATGT ACCCGATCCT ATCGGGCATT ATTGTCGGCC AAGGGCAAAA ACTCTCGACC
GCTAAGGCCT TCACCCTGTC GATGGCCTAT GTGCAAGGTA TGGCGATCAC CTACTCGATT
TTAGGTCTAG TGGTTGCCTC TGCAGGGATG AAATACCAAG CGGCGCTACA GCATCCCGCT
GTGCTGATCT TTTTAGCTAT CCTCTTCTTC GTGCTCAGTT TATCCATGTT TGGTTTGTAC
GATCTCAAAC TGCCTTCAAG CTGGCAGGAG AAGATGAACT CAATTTCAAA CAATCAAAAG
GGCGGCAATT TAGTTGGCGT GTTTTTGATG GGGGTGATCT CGGGATTAGT GGCCTCACCT
TGTACAACGG CCCCACTCTC AGGCGCCTTA GTCTATGTGG CACAAACTGG CGATTTATTG
CAAGGTTTCC TCGCGCTCTA CGTGCTGAGT ATGGGTATGG GTGTACCACT ACTCATCATT
GGTACCTCGG GTGGTAAGTT ACTGCCACGC GCTGGCGCTT GGATGAACAT CATTAAAACC
GTGTTCGGTT TCCTCCTGAT TGCGGTATCG ATTGTGATGC TTGGCCGTAT TTGGACGGGC
GTGGTTTCCG ATGTGCTCTG GTCACTCTGG GGCATTAGCT TCACCGGTTA CCTAATGCAC
CAAAACAAAC TCAGCGCCTT CAACTGGAAA CAAACCGTGC GCTCAGTGCT ACTAACGCTC
ACGCTGTTGG CCAGTTTCTC CTACGGTTTC CAAGCGGTCA TGGGCCACTT TGGCTTTACC
CATGCGCCAA TGGGCGGCGT GGCGACAACT GAGGAGGAAC ACGGCTTTAA ACGGATTAAA
TCCATTGAAG ATTTAGACCG TGAAATCGCA GCCGCAACAG CGGCGGGCAA GCCTGTGATG
CTGGATCTTT ATGCCGATTG GTGTGTGGCC TGTAAAGAGT TTGAAGCCAT CACCTTTAAG
GACGCCGAAG TCTTAGCGCG GATGAATAAA ATAGTGTTAT TACAGGCCGA TGTGACCAAG
AGCGATGCCA TAGATGTGGC ACTGCTGGAG AAATACAACG TCCTCGGTCT GCCCACGCTG
CTGATGTTTA ATGAGCAAGG CGAGCAAAGG GAAGATCTAA GAGTGACTGG CTTTATGGGA
CCGAAAGAAT TTGCCGCCCA TTTAGATCAC TTAGTGAAAT AA
|
|---|
| Protein sequence | MKKLLSLIFT ALLFLTPLTL SGNAFANSFG FLKSEPELMP VDQAFAFDFK QEGNKVTLNW
VIADGYYMYR DKLKFSVNGA ELGTIDLPKG KPHNDEYFGE QEVYYTYIDI PVGLKQADDN
GTLTVTFMGC AEGKLCYPPT KRDVTLKAVA ANDGQIATGA DSSETTEPTA TADAKQTGSA
LSQPITQQDS LSQMLSNDSL LWTLVIFFGL GIGLALTPCV FPMYPILSGI IVGQGQKLST
AKAFTLSMAY VQGMAITYSI LGLVVASAGM KYQAALQHPA VLIFLAILFF VLSLSMFGLY
DLKLPSSWQE KMNSISNNQK GGNLVGVFLM GVISGLVASP CTTAPLSGAL VYVAQTGDLL
QGFLALYVLS MGMGVPLLII GTSGGKLLPR AGAWMNIIKT VFGFLLIAVS IVMLGRIWTG
VVSDVLWSLW GISFTGYLMH QNKLSAFNWK QTVRSVLLTL TLLASFSYGF QAVMGHFGFT
HAPMGGVATT EEEHGFKRIK SIEDLDREIA AATAAGKPVM LDLYADWCVA CKEFEAITFK
DAEVLARMNK IVLLQADVTK SDAIDVALLE KYNVLGLPTL LMFNEQGEQR EDLRVTGFMG
PKEFAAHLDH LVK
|
|---|
| |