| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0519 |
|---|
| Symbol | |
|---|
| ID | 4258323 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 595637 |
|---|
| End bp | 596263 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 638121133 |
|---|
| Product | cytochrome c family protein |
|---|
| Protein accession | YP_736579 |
|---|
| Protein GI | 114046029 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2863] Cytochrome c553 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.135917 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACATTA AAATTAGAAC ATTAACTAAA GGCATCGCAC TGATCTACGG CTGTGCCTTG
ACCTCTGTAG CCATAGCCAA TCCAACTACA GTCCCGCCAG CGGGACAAAT CTGCGTGACC
TGTCACGGCG CCGAAGGCGA GGGCATAGAA CCCCTCGGCC CCCGTCTAGC CGGACTCTCG
AAAGAATACA TCACCACCCA ATTACAACAT TTTCAGGCGG GTGTGCGCCA AAACGCGACC
ATGATGCCGA TGGCGATGAC ATTGCAAGGT GATGGCATCG AGCAAGTGGC GAGTTACTTC
TCCGCCAAAT CACCTAAGAC TGAGGTCAAG CCCGTGATCC GTGGTGAGCA GGTGACCTTT
AGCGACGATA CTGCGCGCTT AGCCTATCAA GGTGATTGGT CTCGCGGCTT ACCGGCCTGC
GTGACTTGCC ATGGCCCCTC GGGTTTAGGT GGCGGCCTGT TCCCACGTTT AGCGGGTCAG
CAGGCCAGTT ATATCAAGAC GCAACTCTTG GCGTGGCAAG CTGGCACTCG TAAGGGAGAT
GTGGACGGCA TGATGGCCAA TGTGGCTAAC AAGCTGACCG CCGCCGAGGT GGATGCCTTA
GCGAACTACT TTGCGAATTT GAAATAA
|
|---|
| Protein sequence | MNIKIRTLTK GIALIYGCAL TSVAIANPTT VPPAGQICVT CHGAEGEGIE PLGPRLAGLS
KEYITTQLQH FQAGVRQNAT MMPMAMTLQG DGIEQVASYF SAKSPKTEVK PVIRGEQVTF
SDDTARLAYQ GDWSRGLPAC VTCHGPSGLG GGLFPRLAGQ QASYIKTQLL AWQAGTRKGD
VDGMMANVAN KLTAAEVDAL ANYFANLK
|
|---|
| |