Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0513 |
Symbol | metL |
ID | 4258317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 588900 |
End bp | 591293 |
Gene Length | 2394 bp |
Protein Length | 797 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638121127 |
Product | bifunctional aspartate kinase II/homoserine dehydrogenase II |
Protein accession | YP_736573 |
Protein GI | 114046023 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0460] Homoserine dehydrogenase [COG0527] Aspartokinases |
TIGRFAM ID | [TIGR00657] aspartate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGTT GTCACTTACA TAAATTTGGT GGTTCCAGCT TAGCCGATGC CGATTGTTAT CGCCGAGTCG CCCATATTCT GTTAACCCAT GGTCATAGTG ATGATCTGGT GGTGGTGTCT GCCGCGGGTA AAACCACAAA CTTTTTATAT AAATTATTGT CCCTGCGCGA TAGCAACCAA TTATGGCAAG AAGAGTTGCA AGTTCTTATC AGCTATCAGC AAGGCTTGAT TGAGCAGCTG TTATCCAATG AGCAAGCGCG GGATTTGCGT GAGCGTTTAA CCACGGATAA AGCCCAGTTA ATCAGTCTGT TATCTTTAGA TTCCCGTAAC GATTACCAAA TTAGCCATGT GGTGAGCTTT GGTGAGCGTT GGTCGGCGCG CCTGATGGCG GCGCTGCTGC GCGAATCGGG TGTGGCCGCA AGCCATGTGG ATGCCTGTTC GATTCTTGTG GCCGACGAGG CCGCCGTACC GCAAATTCGT GTGCAAGAAT CCCGCGCCAA AGTGCAAGCC TTACTGGCCG CGCATCCTAA CGAGCGTTTA GTGATCACAG GTTTTATCTG TGCCAACGAG CGTGGCGATA CCTTGCTATT GGGTCGCAAT GGCTCTGACT TTAGCGCGAG CTTAATTGCT AGCCTCGCCG ACATTGAGCG CGTAACCATT TGGACCGACG TTGAAGGGGT ATTTAACGCC GATCCGAATA AGATCAACGA TGCGAAATTA CTTAAGAGCA TGTCCCTCGC CGAAGCCGAC CGTTTGGCGC GTTTAGGCTC GCCGGTATTG CATTCACGCA CTTTGCAGCC GCTGTTTAAC ACCGAGGTGA GCCTAGCCGT ACGTTCAAGC TACGCCTCCC ATACCGACTT TACCCTGATT GCTCCCCACA GCTCCTCGGC GAGTGCGCCC GTGGTGACCA ACCTGAATGC CGTGGTGTTA TTTGGCTTTA AGATTGCGGG CGATGTGGCC AATCTGCTCG AGCAATTAGT CGAAGCAGGA TTAACGCCGC TGGCCCATTG GGTATCGGCG CATCAACGGC TTGAGCTTGC TTATACCGCT GAAAACCAAA AACAAGTACA AAAGTTATTG GATGCGCAGG CCGAAGCCCT CGGCATTAAA GATCTGCAAA TTAATACCGA ACTCGGTTTA GTGGCGCTTG TGAGTGCCGA TGCCGAGCAT TATCGCCGCA GCTTTGCCCG TTTACTGAGC CGCGACGCTA AGCCCTTGTT CAGTGGTGAT TTAAGTTTGG TGACTTTAGT GCCGCAATCG CAGGTTAATC TGCTGACGCA AAAAGTGCAT CGCCGCTGTG CCGGCCCACG CAAACGCATT GGCGTATTGC TGCTGGGCGT TGGCAATATT GGTGAGGCGT GGGTGAAGCT GTTTAAGTCA GTTTCTCCCT CATTAAATCA AGAGCTTGAA GCGCGTGTTG AACTTGTCGG CTTGGTGAGT TCCAGCAAAG CCCTGATCAA GTCTACGGCT GTGGATTTGG AAAACTGGCA GCAGGAATTC GATGCCGAGG CAACACCTTG GCAATATGAA CATTTATTCG AACAATTAGA ACAACTTAAC TGCGACGAAC TGATTGCATT AGACATCAGT GCTAGCGCCA GTTTAACCCT ACAATACCCA GAGTTTTTCG AGCGCGGCAT CCATATGGTC AGCGCAAACA AACTGGCGGG TTCTGGCCCG TTGCCGTTCT ACCGCGAGCT GAAGGAACAA CTCGGTTATC GCCGTCTATT CTGGCGCTAT AACGCCAGCT GCGGCGCGGG TTTACCTATC CAGCACGCCT TAAACGATTT GCGTAACAGT GGCGATACGG TTGAGGCCGT CGGCGGGATT TTCTCTGGTA CCCTGTGTTG GTTATTCGAG AAATACGATA CCAGCAAACC CTTCTCGGAA TTAGTGGTTG AAGCACGTGG CCTCGGCATT ACCGAACCCG ATCCCCGCGA CGATCTTTCT GGCCGCGACA TGCAGCGAAA GCTGCTGATT TTGGCCCGTG AAATCGGTTT GGAAATCGAG CTTGAGGATA TTGAGTTGCG CTCTTTAGTG CCAGCCCATT TAGCGGATAT TCCATTGGAG CAATTCCTTG CCCGTATCGC TGAGCTGGAT GATGAATTGC AGCAACAATA CGGCGCAGCG GCGGAGCAAA ACAAAGTGCT GAGATATGTC GCCTCCTTGG ACAATAGCGG CGCGGCTTTG AAAGCTGAGG TGGGATTACA GTGGATTGAT GCGAATCATC CCTACGCTAA CCTGACGCCT GGGGACAATG TGTTTGTGAT CCGCTCAGCT TTCTACCAAG GTAATCCGCT GATTATCCGT GGACCGGGTG CGGGGCGTGA GGTGACGGCC GCGGCGGTGC AATCGGATCT GACGCAGATC TGTCGCGATC TGCTGCAGGA ATAG
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Protein sequence | MARCHLHKFG GSSLADADCY RRVAHILLTH GHSDDLVVVS AAGKTTNFLY KLLSLRDSNQ LWQEELQVLI SYQQGLIEQL LSNEQARDLR ERLTTDKAQL ISLLSLDSRN DYQISHVVSF GERWSARLMA ALLRESGVAA SHVDACSILV ADEAAVPQIR VQESRAKVQA LLAAHPNERL VITGFICANE RGDTLLLGRN GSDFSASLIA SLADIERVTI WTDVEGVFNA DPNKINDAKL LKSMSLAEAD RLARLGSPVL HSRTLQPLFN TEVSLAVRSS YASHTDFTLI APHSSSASAP VVTNLNAVVL FGFKIAGDVA NLLEQLVEAG LTPLAHWVSA HQRLELAYTA ENQKQVQKLL DAQAEALGIK DLQINTELGL VALVSADAEH YRRSFARLLS RDAKPLFSGD LSLVTLVPQS QVNLLTQKVH RRCAGPRKRI GVLLLGVGNI GEAWVKLFKS VSPSLNQELE ARVELVGLVS SSKALIKSTA VDLENWQQEF DAEATPWQYE HLFEQLEQLN CDELIALDIS ASASLTLQYP EFFERGIHMV SANKLAGSGP LPFYRELKEQ LGYRRLFWRY NASCGAGLPI QHALNDLRNS GDTVEAVGGI FSGTLCWLFE KYDTSKPFSE LVVEARGLGI TEPDPRDDLS GRDMQRKLLI LAREIGLEIE LEDIELRSLV PAHLADIPLE QFLARIAELD DELQQQYGAA AEQNKVLRYV ASLDNSGAAL KAEVGLQWID ANHPYANLTP GDNVFVIRSA FYQGNPLIIR GPGAGREVTA AAVQSDLTQI CRDLLQE
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