Gene Shewmr7_0513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0513 
SymbolmetL 
ID4258317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp588900 
End bp591293 
Gene Length2394 bp 
Protein Length797 aa 
Translation table11 
GC content52% 
IMG OID638121127 
Productbifunctional aspartate kinase II/homoserine dehydrogenase II 
Protein accessionYP_736573 
Protein GI114046023 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0460] Homoserine dehydrogenase
[COG0527] Aspartokinases 
TIGRFAM ID[TIGR00657] aspartate kinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGTT GTCACTTACA TAAATTTGGT GGTTCCAGCT TAGCCGATGC CGATTGTTAT 
CGCCGAGTCG CCCATATTCT GTTAACCCAT GGTCATAGTG ATGATCTGGT GGTGGTGTCT
GCCGCGGGTA AAACCACAAA CTTTTTATAT AAATTATTGT CCCTGCGCGA TAGCAACCAA
TTATGGCAAG AAGAGTTGCA AGTTCTTATC AGCTATCAGC AAGGCTTGAT TGAGCAGCTG
TTATCCAATG AGCAAGCGCG GGATTTGCGT GAGCGTTTAA CCACGGATAA AGCCCAGTTA
ATCAGTCTGT TATCTTTAGA TTCCCGTAAC GATTACCAAA TTAGCCATGT GGTGAGCTTT
GGTGAGCGTT GGTCGGCGCG CCTGATGGCG GCGCTGCTGC GCGAATCGGG TGTGGCCGCA
AGCCATGTGG ATGCCTGTTC GATTCTTGTG GCCGACGAGG CCGCCGTACC GCAAATTCGT
GTGCAAGAAT CCCGCGCCAA AGTGCAAGCC TTACTGGCCG CGCATCCTAA CGAGCGTTTA
GTGATCACAG GTTTTATCTG TGCCAACGAG CGTGGCGATA CCTTGCTATT GGGTCGCAAT
GGCTCTGACT TTAGCGCGAG CTTAATTGCT AGCCTCGCCG ACATTGAGCG CGTAACCATT
TGGACCGACG TTGAAGGGGT ATTTAACGCC GATCCGAATA AGATCAACGA TGCGAAATTA
CTTAAGAGCA TGTCCCTCGC CGAAGCCGAC CGTTTGGCGC GTTTAGGCTC GCCGGTATTG
CATTCACGCA CTTTGCAGCC GCTGTTTAAC ACCGAGGTGA GCCTAGCCGT ACGTTCAAGC
TACGCCTCCC ATACCGACTT TACCCTGATT GCTCCCCACA GCTCCTCGGC GAGTGCGCCC
GTGGTGACCA ACCTGAATGC CGTGGTGTTA TTTGGCTTTA AGATTGCGGG CGATGTGGCC
AATCTGCTCG AGCAATTAGT CGAAGCAGGA TTAACGCCGC TGGCCCATTG GGTATCGGCG
CATCAACGGC TTGAGCTTGC TTATACCGCT GAAAACCAAA AACAAGTACA AAAGTTATTG
GATGCGCAGG CCGAAGCCCT CGGCATTAAA GATCTGCAAA TTAATACCGA ACTCGGTTTA
GTGGCGCTTG TGAGTGCCGA TGCCGAGCAT TATCGCCGCA GCTTTGCCCG TTTACTGAGC
CGCGACGCTA AGCCCTTGTT CAGTGGTGAT TTAAGTTTGG TGACTTTAGT GCCGCAATCG
CAGGTTAATC TGCTGACGCA AAAAGTGCAT CGCCGCTGTG CCGGCCCACG CAAACGCATT
GGCGTATTGC TGCTGGGCGT TGGCAATATT GGTGAGGCGT GGGTGAAGCT GTTTAAGTCA
GTTTCTCCCT CATTAAATCA AGAGCTTGAA GCGCGTGTTG AACTTGTCGG CTTGGTGAGT
TCCAGCAAAG CCCTGATCAA GTCTACGGCT GTGGATTTGG AAAACTGGCA GCAGGAATTC
GATGCCGAGG CAACACCTTG GCAATATGAA CATTTATTCG AACAATTAGA ACAACTTAAC
TGCGACGAAC TGATTGCATT AGACATCAGT GCTAGCGCCA GTTTAACCCT ACAATACCCA
GAGTTTTTCG AGCGCGGCAT CCATATGGTC AGCGCAAACA AACTGGCGGG TTCTGGCCCG
TTGCCGTTCT ACCGCGAGCT GAAGGAACAA CTCGGTTATC GCCGTCTATT CTGGCGCTAT
AACGCCAGCT GCGGCGCGGG TTTACCTATC CAGCACGCCT TAAACGATTT GCGTAACAGT
GGCGATACGG TTGAGGCCGT CGGCGGGATT TTCTCTGGTA CCCTGTGTTG GTTATTCGAG
AAATACGATA CCAGCAAACC CTTCTCGGAA TTAGTGGTTG AAGCACGTGG CCTCGGCATT
ACCGAACCCG ATCCCCGCGA CGATCTTTCT GGCCGCGACA TGCAGCGAAA GCTGCTGATT
TTGGCCCGTG AAATCGGTTT GGAAATCGAG CTTGAGGATA TTGAGTTGCG CTCTTTAGTG
CCAGCCCATT TAGCGGATAT TCCATTGGAG CAATTCCTTG CCCGTATCGC TGAGCTGGAT
GATGAATTGC AGCAACAATA CGGCGCAGCG GCGGAGCAAA ACAAAGTGCT GAGATATGTC
GCCTCCTTGG ACAATAGCGG CGCGGCTTTG AAAGCTGAGG TGGGATTACA GTGGATTGAT
GCGAATCATC CCTACGCTAA CCTGACGCCT GGGGACAATG TGTTTGTGAT CCGCTCAGCT
TTCTACCAAG GTAATCCGCT GATTATCCGT GGACCGGGTG CGGGGCGTGA GGTGACGGCC
GCGGCGGTGC AATCGGATCT GACGCAGATC TGTCGCGATC TGCTGCAGGA ATAG
 
Protein sequence
MARCHLHKFG GSSLADADCY RRVAHILLTH GHSDDLVVVS AAGKTTNFLY KLLSLRDSNQ 
LWQEELQVLI SYQQGLIEQL LSNEQARDLR ERLTTDKAQL ISLLSLDSRN DYQISHVVSF
GERWSARLMA ALLRESGVAA SHVDACSILV ADEAAVPQIR VQESRAKVQA LLAAHPNERL
VITGFICANE RGDTLLLGRN GSDFSASLIA SLADIERVTI WTDVEGVFNA DPNKINDAKL
LKSMSLAEAD RLARLGSPVL HSRTLQPLFN TEVSLAVRSS YASHTDFTLI APHSSSASAP
VVTNLNAVVL FGFKIAGDVA NLLEQLVEAG LTPLAHWVSA HQRLELAYTA ENQKQVQKLL
DAQAEALGIK DLQINTELGL VALVSADAEH YRRSFARLLS RDAKPLFSGD LSLVTLVPQS
QVNLLTQKVH RRCAGPRKRI GVLLLGVGNI GEAWVKLFKS VSPSLNQELE ARVELVGLVS
SSKALIKSTA VDLENWQQEF DAEATPWQYE HLFEQLEQLN CDELIALDIS ASASLTLQYP
EFFERGIHMV SANKLAGSGP LPFYRELKEQ LGYRRLFWRY NASCGAGLPI QHALNDLRNS
GDTVEAVGGI FSGTLCWLFE KYDTSKPFSE LVVEARGLGI TEPDPRDDLS GRDMQRKLLI
LAREIGLEIE LEDIELRSLV PAHLADIPLE QFLARIAELD DELQQQYGAA AEQNKVLRYV
ASLDNSGAAL KAEVGLQWID ANHPYANLTP GDNVFVIRSA FYQGNPLIIR GPGAGREVTA
AAVQSDLTQI CRDLLQE