| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0499 |
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| Symbol | rimO |
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| ID | 4256382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 572762 |
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| End bp | 574192 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638121113 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | YP_736559 |
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| Protein GI | 114046009 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.717124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGTTG AAACTTTTAA TCCTAAGCAA ACAACCACGC TTGAGACCCC AGCCAAGACA
TTAGAAGCAG CGAGTGCTGA TTCTACTGCT ACCGGGAATC GCATCGGTTT CGTGTCTTTG
GGTTGCCCAA AAAACCTAGT GGACTCAGAG CGCATTCTGA CCCAATTACG CATCGACGGC
TATGAAGTCA CCAACAGCTA CGACAATGCC GATCTGGTTA TAGTCAACAC CTGTGGCTTT
ATCGATGCGG CGGTTGAAGA ATCCTTAGAT GCGGTGCGCG AAGCCCTAGA AGAAAACGGC
AAAGTGATCG TGACCGGCTG TTTAGGCGCC AAGGAAAACC AAATCCGTGA AGTGCACCCA
GACGTGCTCG AAATCACGGG GCCACACAGC TACGAAGCCG TGTTAAAGCA TGTACACAAG
TACGTGCCAA AACCAGAGCA CAACCCATTT ACCTCGTTAA TCCCACAAAC TGGGGTTAAG
TTAACGCCTA AGCATTACGC TTATTTAAAG ATTTCAGAGG GTTGTGATAA CCGTTGTACC
TTCTGCATCA TCCCAGCACT GCGTGGCGAT TTAGACAGCC GCCCAGCGGG TAGCGTATTA
GATGAAGCCA AGCGTTTAGT TGAATCGGGC GTGCAAGAAA TTTTAGTCGT TAGCCAAGAC
ACCTCTGCCT ACGGTAAAGA CAAGGGCGGC CGCACCGATT TCTGGAACGG TATGCCAGTG
AAGCAAGACA TCACTAGCCT TGCTCGCCAA CTGGGCAAGA TGGGCGCTTG GGTACGTTTA
CACTACATCT ACCCATACCC ATGGGTTGAC GATCTGATCC CCTTGATGGC CGAAGGTTTA
ATCCTGCCAT ACCTAGATAT TCCGATGCAG CACGCCAGCC CACGCATCCT GAAGATGATG
AAGCGTCCAG GCCGTGTTGA CCGTCAGTTA GAAGCCATCC AACGCTGGCG CGAAATCTGC
CCAGACTTGG TGATCCGCTC AACCTTCATC GTGGGCTTCC CTGGCGAAAC AGAAGAAGAT
TTCGAAATGC TACTCGACTT CCTGCGTGAA GCGCGCCTCG ACCGCGTAGG CTGCTTCAAG
TACTCAGAAG TAGAAGGCGC TGTAGCGAAC ACTATCGCTG AACTTATCAG CGAAGACGTG
AAGGAAGACA GATACCACAG ATTTATGGAA GTCCAGGCCG AGATCAGCGC CGAGCGTTTA
GCCCGTTTCG TTGGCCGCAC TATGGATATT CTGATCGATG ACGTAGACGA AGAAGGCGCC
ATTGGCCGCA GCTTCGCCGA TGCTCCAGAA ATCGACGGCA TGGTCTTTAT CAACGGTGAA
ACCGAACTCG AACCCGGCAT GTTAGTTCGT GCTGTAATCA CTCACTCGGA CGAGCACGAT
CTGTGGGCCG AGTTAGTCGA CGCCGACGCA GAAGATGATA TCGAGGCTTA A
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| Protein sequence | MTVETFNPKQ TTTLETPAKT LEAASADSTA TGNRIGFVSL GCPKNLVDSE RILTQLRIDG
YEVTNSYDNA DLVIVNTCGF IDAAVEESLD AVREALEENG KVIVTGCLGA KENQIREVHP
DVLEITGPHS YEAVLKHVHK YVPKPEHNPF TSLIPQTGVK LTPKHYAYLK ISEGCDNRCT
FCIIPALRGD LDSRPAGSVL DEAKRLVESG VQEILVVSQD TSAYGKDKGG RTDFWNGMPV
KQDITSLARQ LGKMGAWVRL HYIYPYPWVD DLIPLMAEGL ILPYLDIPMQ HASPRILKMM
KRPGRVDRQL EAIQRWREIC PDLVIRSTFI VGFPGETEED FEMLLDFLRE ARLDRVGCFK
YSEVEGAVAN TIAELISEDV KEDRYHRFME VQAEISAERL ARFVGRTMDI LIDDVDEEGA
IGRSFADAPE IDGMVFINGE TELEPGMLVR AVITHSDEHD LWAELVDADA EDDIEA
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