| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0490 |
|---|
| Symbol | |
|---|
| ID | 4255617 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 560549 |
|---|
| End bp | 561700 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 638121104 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_736550 |
|---|
| Protein GI | 114046000 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTAT GGCAGCTTGT GCTGACAGAA TTAAAGGCGA TTGTGAGCGA CAAGGCAATT
GCCGTGACCC TATTCGGCGG TGTGCTGTTT TATTCGGTGC TCTACCCTTT GCCTTACTTG
CACCAAGTCC CAACAGAACA ACAGCTTATC GTGGTGGATT TAGATCATTC CTCCCTGAGC
CGTCAACTTA TTCGCCATGC GGATGCCAGC GCCAAAATCC AAGTCATAGG CCAAGTGGGC
TCCATTACCG AGGCGAAGCG TTTTATCGAA ACTGGCAAAG CCCATGGTTT ATTGGTGATC
CCCGAAGGAT TTCGCCGCGA CTTGCTGCTG GGTAAGGGCG TGACCTTAAG CTACGGCGGC
GATGCCAGTT ACTTCTTGAT TTATTCGGCG GTGGCCGAGG GGCTTGTCAG TGCGGGAATG
GATGCGGGTA AGCAAGTGCA GTTAATTGGG ATGCTCGCGC AGGGGAAAAA TCCAAAAGAA
GCCGAGCAGA ACCTAAACTC GCTGCATTTA AACAGTGTGC CTGCCTTTAA CCCTAGCCTA
GGTTATACCC CCTACGTGGT TCCAGGGCTG TTCTTACTTA TCCTGCATCA AACCTTGTTG
ATTGGAACCG GGATCCTCGG TGCGGGGCAG TGGCGCAGCC GCAGCTATTG GCAGCAGGTG
TCGCCGCTGC AATTGGTCTG CGGTCGTATT CTCGCCTTTA TGTTGATTTA TATGGTGTTT
ACCAGCTTTT ATGTGGGGTA TTGCTACCAC TGGTATAAGG TGAGTATTCA GGCGAGTCTT
GGTTTAGTGG CGCTATGGTT GCTGCCGTTT TTATTGGCGA CGGCCGCGGC CGGAGTCGCA
ATGAGCACGC TGTTTAGTCG CCGTGACCTA CCGACTCAAG TATTGCTGCT GATTTCTATG
CCGATTCTGT TTGTCTCCGG CTTTGTCTGG CCGATTGCAT TAATTCCCGA GCCTTTGGTG
CTGGGCTCGC AGATAATCCC TGCGGTGCCC GCCATTATGG GGATGTTGGA GCTGAACCAA
ATGGGCGCAA GCTGGGCGAG TGTGCTGCCA AAATGGTTAC AGCTTTGGGG TTTGTTTGTG
CTGTTTTTTG GTCTTGCGAT TTTAGGGATC AAACGTCGGG CGCGGGCATT GGCTGAACCC
AGTACATCCT AG
|
|---|
| Protein sequence | MNLWQLVLTE LKAIVSDKAI AVTLFGGVLF YSVLYPLPYL HQVPTEQQLI VVDLDHSSLS
RQLIRHADAS AKIQVIGQVG SITEAKRFIE TGKAHGLLVI PEGFRRDLLL GKGVTLSYGG
DASYFLIYSA VAEGLVSAGM DAGKQVQLIG MLAQGKNPKE AEQNLNSLHL NSVPAFNPSL
GYTPYVVPGL FLLILHQTLL IGTGILGAGQ WRSRSYWQQV SPLQLVCGRI LAFMLIYMVF
TSFYVGYCYH WYKVSIQASL GLVALWLLPF LLATAAAGVA MSTLFSRRDL PTQVLLLISM
PILFVSGFVW PIALIPEPLV LGSQIIPAVP AIMGMLELNQ MGASWASVLP KWLQLWGLFV
LFFGLAILGI KRRARALAEP STS
|
|---|
| |