Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0483 |
Symbol | |
ID | 4255610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 548707 |
End bp | 550173 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638121097 |
Product | ribonuclease G |
Protein accession | YP_736543 |
Protein GI | 114045993 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.605278 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTTCAG AATTACTGAT TAACGTAACC CCATCTGAGG CACGTGTGGC TCTGGTTGAG CATGGCGTGC TGCAAGAAGT CCATATCGAG AGGCGCATGA AGCGCGGTCT AGTGGGCAAT ATTTACAAGG GCAAAATCAG CCGGGTGTTG CCCGGCATGC AAGCCGCCTT TGTGGATATT GGCTTAGATA AGGCCGCGTT TTTACATGCC TCCGACATAG TGCCGCACAC CGAATGCGTG GCCGATGTGG AAAAAGGCCA TTTTGTGGTC CGTGATATCG CCGAGTTGGT TCGCCAGGGG CAAGATATTA TGGTGCAGGT GGTAAAAGAT CCCCTCGGCA CTAAAGGTGC GCGCCTGACC ACTGATATCA CACTGCCTTC CCGTTATCTG GTATTTATGC CCGGCTCAAG CCATGTTGGG GTGTCCCAGC GGATTGAGCA GGAAGAAGAG CGCAGTCGTC TTAAGAAAAT CACTCTGCCT TTCGTCGATG AAGACGGCGG TTTTATTATC CGCACCGCCG CCGAAGGCGT AGGTGAGGAT GAACTTGCCC AGGATGCGGC CTTCCTGCGT CGGGTATGGT CTAAGGTCTC CGAGCGGCGT CAGCGCCGTG GCGTGGCACT CTTGTATCAA GACCTCGCCC TGCCAGTGCG CATTGTGCGC GACTTTGTCG GAACCGAGCT CGACAGAATT CAAGTCGATT CGCGTCGCAC CTTTGCCGAG CTGCAAGCCT TCGCCCAAGA GTTTATGCCG GAAATCGCCG ATAAGATTGA GCACTATTCT GGGCCTGCAC CGATTTTCGA TCTCTACGAT GTGGAGAATG AAATCCAGCG CGCACTGGGT CGCAAGGTCG AACTCAAATC GGGTGGCTAT CTGATTATCG ATCAGACCGA GGCCATGACC ACGGTCGATA TCAACACAGG TGCCTTTGTC GGACACCGTA ATCTTGAAGA AACCATCTTC AACACTAACC TCGAAGCTAC TCAAGCCATC GCGCGGCAAC TGCGGCTACG TAATCTCGGC GGCATCATCA TTATCGACTT TATCGATATG CTGAGCGACG AGCATAAAAC GCGGGTACTC AATAGCTTAA ATAGCGCGCT CGCCAAGGAC AGAGTCAAAA CCAACGTCAG TGGCTTCTCG GGTCTGGGGT TAGTGGAAAT GACCCGCAAG CGCACCCGAG AGAGCTTAGA GCATGTGCTG TGTGGCGAAT GCCCCGCCTG TCAAGGGACC GGCAGCATGA AGACGGTTGA AACGGTTTCT TATGAAATCT TCCGCGAAAT TATTCGCTTG AATCGAGCCT ATGATGCCGA TGAGTTTTTG CTTTACTGCT CGCCCGCTGT ATATAACAGC TTAAGTGGCG ATGAAAGTCA TCTGGTCGCC GAGCTTGAGG TCTACATAGG TAAACGCATT CGCCTGCAAA ATGAGCCCAT GTATTCCCAG CATAAATACG ACGTGGTGAT GATGTAG
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Protein sequence | MGSELLINVT PSEARVALVE HGVLQEVHIE RRMKRGLVGN IYKGKISRVL PGMQAAFVDI GLDKAAFLHA SDIVPHTECV ADVEKGHFVV RDIAELVRQG QDIMVQVVKD PLGTKGARLT TDITLPSRYL VFMPGSSHVG VSQRIEQEEE RSRLKKITLP FVDEDGGFII RTAAEGVGED ELAQDAAFLR RVWSKVSERR QRRGVALLYQ DLALPVRIVR DFVGTELDRI QVDSRRTFAE LQAFAQEFMP EIADKIEHYS GPAPIFDLYD VENEIQRALG RKVELKSGGY LIIDQTEAMT TVDINTGAFV GHRNLEETIF NTNLEATQAI ARQLRLRNLG GIIIIDFIDM LSDEHKTRVL NSLNSALAKD RVKTNVSGFS GLGLVEMTRK RTRESLEHVL CGECPACQGT GSMKTVETVS YEIFREIIRL NRAYDADEFL LYCSPAVYNS LSGDESHLVA ELEVYIGKRI RLQNEPMYSQ HKYDVVMM
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