Gene Shewmr7_0481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0481 
Symbol 
ID4255608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp547478 
End bp547966 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content49% 
IMG OID638121095 
Productrod shape-determining protein MreD 
Protein accessionYP_736541 
Protein GI114045991 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2891] Cell shape-determining protein 
TIGRFAM ID[TIGR03426] rod shape-determining protein MreD 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.811666 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTAC AAGCTGCTAA TGGCAGACTC GTGGTATGGC TGACCCTCTT TGTCGGGCTC 
TTGAGCCAGA TTATGCCGCT GCCTTCGATT GTCGAAGCCT GGCGTCCCGA TTGGCTATTG
ATGATCTTAA TTTATTGGTC AATTGCGCTG CCCCACAGAT ATAACATTCT CACGGCCTGG
CTGATGGGAT TGGCCCTCGA TATTCTGCTC GGCGCCACCT TAGGCGTGCG CTCGCTGGCC
ATGTCGCTGG TGATTTATAT TGCGATTTTG CATTGTCAGC GTTTACGTAA CTTCCCTAAG
TGGCAACAGT CGCTGGTGGT GATGGTGCTG ATCGTTATCT ATCACCTGAT CATCTACTGG
GTCGAGTTTG TGATGGATGG CGCTAAGTTC CATACGGATC TGTTTTTACC CGCACTATCT
GGGTTGGCAT TCTGGCCATG GATTTTTTGG ATTTTACGTC GTGTTCGACG TCATTATAAG
GTTCGTTAG
 
Protein sequence
MSLQAANGRL VVWLTLFVGL LSQIMPLPSI VEAWRPDWLL MILIYWSIAL PHRYNILTAW 
LMGLALDILL GATLGVRSLA MSLVIYIAIL HCQRLRNFPK WQQSLVVMVL IVIYHLIIYW
VEFVMDGAKF HTDLFLPALS GLAFWPWIFW ILRRVRRHYK VR