| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0445 |
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| Symbol | |
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| ID | 4256573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 507722 |
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| End bp | 508897 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638121059 |
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| Product | ornithine decarboxylase |
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| Protein accession | YP_736505 |
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| Protein GI | 114045955 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00713541 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAAT TTCAATCTAT TGATGTTGCT GACTATTATG ATGCTCAAAC CTTCAAACGT
ATTGAAGAGT TTGCCAAAGA TAAAGCGACC CCGTTCGTAG TGATTGATAC CAATATCATT
GCGAAACAAT ACGATGACAT GGTTAATAGT TTTCCTTATG CCGATGTTTA TTATGCAGTT
AAGGCAAACC CGGCGGCTGA GATCCTGACG TTACTGAAAA ACAAAGGGTC AAACTTCGAT
ATTGCGTCGA TTTATGAATT AGATATGGTC ACTAACGTGG GCGTAACACC TGACCGCGTG
AGCTATGGCA ACACCATCAA AAAGCGTCAA GATGTACGTG CGTTTTATGA GCGTGGTGTG
CGTATGTATG CATCGGATTC TGAGGCCGAC TTACGTATGA TCGCCGAAGA AGCGCCGGGT
TCACGTATCT ATGTGCGCAT CCTGACCGAA GGCACAGACA CCGCAGATTG GCCACTGTCT
CGTAAGTTTG GTTGCCAAAA TGAGATGGCT TATGAGCTGT TAGTTCTGGC GAAGGAACTA
GGTTTAGAGC CCTTTGGTAT TTCATTCCAC GTGGGGTCAC AGCAACGTGA TATCGGTGCT
TGGGATTCGG CGATTGGTAA AGTGAAGAGC ATCTTCGATC GTCTGCGTGA TGAGCACAAC
ATCGTCCTTA AGATGATCAA CATGGGTGGT GGCTTCCCAG CTAACTATAT CGACAAAACC
AATCAACTTG GTGTGTATGC TGAGCAAATC ACCCACTTCC TGAAGGAAGA TTTTGGTGAT
GATTTGCCAC AGATCATTCT GGAGCCGGGT CGCTCGCTGA TCTCTAACGC TGGGGTATTG
GTGTCTGAGG TGGTGCTGAT CAGTAAGAAA TCCTACACCG CATTAGAGCG TTGGGTATTT
ACCGATGTGG GTAAGTTCTC TGGTTTAATC GAAACCATGG ATGAGGCGAT TAAATTCCCA
ATCTTCACCC ACAAACAAGG TGAGTTGGAT AAATGTGTTA TCGCCGGCCC AACCTGCGAT
AGCGCCGACA TCATGTACGA ACACTACAGC TATGGTCTGC CGAATGACCT AGCGATTGGA
GACCGTATGT ACTGGTTAAC AGCCGGTGCT TACACCACCA CTTATTCAGC GGTGTGCTTT
AACGGTTTCC CACCACTGAA GGATTACTAC CTGTAA
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| Protein sequence | MSQFQSIDVA DYYDAQTFKR IEEFAKDKAT PFVVIDTNII AKQYDDMVNS FPYADVYYAV
KANPAAEILT LLKNKGSNFD IASIYELDMV TNVGVTPDRV SYGNTIKKRQ DVRAFYERGV
RMYASDSEAD LRMIAEEAPG SRIYVRILTE GTDTADWPLS RKFGCQNEMA YELLVLAKEL
GLEPFGISFH VGSQQRDIGA WDSAIGKVKS IFDRLRDEHN IVLKMINMGG GFPANYIDKT
NQLGVYAEQI THFLKEDFGD DLPQIILEPG RSLISNAGVL VSEVVLISKK SYTALERWVF
TDVGKFSGLI ETMDEAIKFP IFTHKQGELD KCVIAGPTCD SADIMYEHYS YGLPNDLAIG
DRMYWLTAGA YTTTYSAVCF NGFPPLKDYY L
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