| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0433 |
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| Symbol | hslU |
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| ID | 4255665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 492622 |
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| End bp | 493950 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638121047 |
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| Product | ATP-dependent protease ATP-binding subunit HslU |
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| Protein accession | YP_736493 |
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| Protein GI | 114045943 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.715653 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAA TGACCCCCCG TGAGATTGTC CACGAGCTGG ATGCCCACAT TATCGGCCAG
AAAAAGGCCA AGCGTTCCGT CGCCGTCGCC CTGCGTAACC GCTGGCGCCG CATGCAATTG
GATGCCGACT TCCGTCAAGA AGTCACCCCA AAAAACATTC TGATGATTGG CCCAACCGGC
GTAGGTAAAA CCGAAATCGC CCGCCGTTTG GCAAAGCTAG CCAACGCGCC GTTCATCAAG
GTTGAAGCCA CTAAGTTCAC CGAAGTGGGT TACGTGGGTA AAGAAGTCGA GCAAATCATC
CGTGATTTAA CCGACATCGC CATTAAGCTG ACCCGCGAGC AACAAATGGG CAAATGCCGC
CAACGCGCCG AAGAACACGC CGAAGAGCGT ATTCTCGATG CCCTGCTGCC TAAGCCGAAA
AACGACTGGG ACAGCACGGA TAGCGACGCT AACTCTAATA CCCGTCAAAT CTTCCGCAAG
AAGCTGCGCG AAGGCCAGTT AGACGACAAA GAAATCGATA TCGATGTGGC CCAGCCACAG
GTGGGTATCG AAATCATGTC GCCACCTGGC ATGGAAGAAA TGACCAACCA ACTGCAAAGC
CTGTTTAAAA ACATGGGCCA AGCACCAGCC AAACGTCGCA AGATGAAGAT CAAAGAAGCG
TTCAAGCTGT TGATCGAAGA AGAAGCGGCC AAACTGGTTA ATCAAGAAGA TTTAAAAGAG
CAAGCCATTG AATTGGTTGA GCAGCACGGC ATAGTGTTCC TCGACGAAAT CGACAAGATC
TGTAAACGTG GCGAAACCTC TGGCCCAGAC GTGTCCCGCG AAGGCGTACA GCGCGACCTG
TTACCTTTAG TCGAAGGCTG CACAGTCACC ACTAAACACG GCATGGTGAA AACCGACCAT
ATTCTGTTTA TCGCTTCGGG CGCGTTCCAA ATGGCAAAAC CTTCGGATTT AATCCCAGAG
TTACAAGGAC GTTTACCGAT CCGCGTTGAG CTAGATGCGT TATCAGCCGA TGATTTTAAA
CGTATTTTAA CTGAGCCGCA CGCCTCACTG ACCGAGCAAT ATATCGCGCT GATGGCCACC
GAAGGCGTGA CTATTGAGTT TGCAGAGTCG GGCATCGAGA GTATCGCCAA GGCGGCATGG
CAAGTGAACG AGCGCACCGA AAACATTGGT GCCCGTCGTC TGCATACCGT GATGGAAAAG
CTGATGGAAG ATATCTCCTA TGAGGCATCC GACAAGTCTG GCAGCTCATT TGTGATTGAT
GCCGATTATG TGAGTGCTCA CTTAGATAAT CTGGTTCAAG ACGAAGACCT AAGCCGCTTT
ATCCTGTAA
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| Protein sequence | MSEMTPREIV HELDAHIIGQ KKAKRSVAVA LRNRWRRMQL DADFRQEVTP KNILMIGPTG
VGKTEIARRL AKLANAPFIK VEATKFTEVG YVGKEVEQII RDLTDIAIKL TREQQMGKCR
QRAEEHAEER ILDALLPKPK NDWDSTDSDA NSNTRQIFRK KLREGQLDDK EIDIDVAQPQ
VGIEIMSPPG MEEMTNQLQS LFKNMGQAPA KRRKMKIKEA FKLLIEEEAA KLVNQEDLKE
QAIELVEQHG IVFLDEIDKI CKRGETSGPD VSREGVQRDL LPLVEGCTVT TKHGMVKTDH
ILFIASGAFQ MAKPSDLIPE LQGRLPIRVE LDALSADDFK RILTEPHASL TEQYIALMAT
EGVTIEFAES GIESIAKAAW QVNERTENIG ARRLHTVMEK LMEDISYEAS DKSGSSFVID
ADYVSAHLDN LVQDEDLSRF IL
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